DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Bre1 and CG32581

DIOPT Version :9

Sequence 1:NP_001286950.1 Gene:Bre1 / 38652 FlyBaseID:FBgn0086694 Length:1044 Species:Drosophila melanogaster
Sequence 2:NP_001096988.2 Gene:CG32581 / 318098 FlyBaseID:FBgn0052581 Length:283 Species:Drosophila melanogaster


Alignment Length:97 Identity:30/97 - (30%)
Similarity:41/97 - (42%) Gaps:16/97 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   960 KAERMKKMEMSGTTIDEVMIEEIREYKET-----LTCPSCKVKRKDAVLSKCFHVFCYDCLRTRY 1019
            ||:........||..|....|:.:|.:.|     ..|..|....||||:|.|.|:||:.||....
  Fly    89 KADLKGGYPFGGTDTDTKANEKDKEKEHTADDSLYECNICLDTAKDAVVSMCGHLFCWPCLHQWL 153

  Fly  1020 ETR--QRKCPKCNCA---------FGANDYHR 1040
            .||  ::.||.|..|         :|.|..|:
  Fly   154 LTRPNRKLCPVCKAAVDKDKVIPLYGRNSTHQ 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bre1NP_001286950.1 SMC_prok_B <235..987 CDD:274008 7/26 (27%)
AAA_23 <654..762 CDD:290211
zf-C3HC4_2 991..1029 CDD:290634 17/39 (44%)
CG32581NP_001096988.2 RING 124..169 CDD:238093 18/44 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R146
SonicParanoid 00.000 Not matched by this tool.
11.030

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