DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cralbp and PATL1

DIOPT Version :10

Sequence 1:NP_523939.1 Gene:Cralbp / 38651 FlyBaseID:FBgn0035636 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_177360.1 Gene:PATL1 / 843546 AraportID:AT1G72150 Length:573 Species:Arabidopsis thaliana


Alignment Length:282 Identity:66/282 - (23%)
Similarity:109/282 - (38%) Gaps:69/282 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 LQNVRCDDTFLLRFLRAKKFSVPMAEQTLLKYLNIRRTFPHMSTQLDYLEPRLGDLIDQG----- 106
            ||:.| .|..|.:||||:.|.|..|...|...:..|:            |.::.:|::.|     
plant   250 LQDER-SDVILTKFLRARDFKVKEALTMLKNT
VQWRK------------ENKIDELVESGEEVSE 301

  Fly   107 ---YIFAVPQRDKHGRRVVVINAKGLNPKIHTSCDQAKAH-FLTYECLMEDQETQI--------- 158
               .:|| ...||.| .||:.::.|.........|:.|.: ||::...::::..:.         
plant   302 FEKMVFA-HGVDKEG-HVVIYSSYGEFQNKELFSDKEKLNKFLSWRIQLQEKCVRAIDFSNPEAK 364

  Fly   159 TGLTHVGDFAGVT-TAHVTNWNPTEF-ARIFKWGEQSLP-MRHKEIHLINVPSTLKWLIDFVKN- 219
            :....|.||.... ......|   :| .|..|..|.:.| ...||: .||||   .|.|.:.|. 
plant   365 SSFVFVSDFRNAPGLGKRALW---QFIRRAVKQFEDNYPEFAAKEL-FINVP---WWYIPYYKTF 422

  Fly   220 ---RVSSKMKNRLIIYGSEKE---LMKSVDQGCLPLEMGG---KVPMRE--------------MI 261
               ..|.:.::::::.|..|.   :.|.:....:|::.||   ..|:.|              .|
plant   423 GSIITSPRTRSKMVLAGPSKSADTIFKYIAPEQVPVKYGGLSKDTPLTEETITEAIVKPAANYTI 487

  Fly   262 ELWKQELAT-KRDL-ILGLDKS 281
            ||...|..| ..:| :||.|.|
plant   488 ELPASEACTLSWELRVLGADVS 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CralbpNP_523939.1 CRAL_TRIO_N 31..78 CDD:215024 13/30 (43%)
SEC14 106..254 CDD:469559 38/178 (21%)
PATL1NP_177360.1 CRAL_TRIO_N <247..280 CDD:215024 13/30 (43%)
SEC14 310..465 CDD:214706 35/162 (22%)

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