DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cralbp and rlbp1a

DIOPT Version :9

Sequence 1:NP_523939.1 Gene:Cralbp / 38651 FlyBaseID:FBgn0035636 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_956999.1 Gene:rlbp1a / 393678 ZFINID:ZDB-GENE-040426-1662 Length:312 Species:Danio rerio


Alignment Length:271 Identity:78/271 - (28%)
Similarity:131/271 - (48%) Gaps:19/271 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 VQDQGETTG----LPEALLKIAKRELREDRCTREQSLEQLR----------NWVAKNEDLQNVRC 52
            |:|.|...|    ||:...:.||.||.|....|..::::||          :.|||....:..:.
Zfish    26 VKDHGPVYGPCMKLPDHTKQKAKDELNETDEKRASAIKELRAMIKDKAGQGDEVAKTVQDKFGKE 90

  Fly    53 DDTFLLRFLRAKKFSVPMAEQTLLKYLNIRRTFPHMSTQLDYLEPR-LGDLIDQGYIFAVPQRDK 116
            .|:.||||:||:||.|..|.:.:..|:..||.:|.:   .:.|.|. :...|:.||...:..|||
Zfish    91 PDSLLLRFIRARKFDVARAHELMKGYVRFRRDYPEL---FENLTPEAVRSTIEAGYPRILSTRDK 152

  Fly   117 HGRRVVVINAKGLNPKIHTSCDQAKAHFLTYECLMEDQETQITGLTHVGDFAGVTTAHVTNWNPT 181
            :||.|::.|....:.:..|..:..:|:.:..|.|:|::||||.|...:.:|.|.|..|.:....|
Zfish   153 NGRVVLLFNIDNWDLEEVTFDETLRAYCVILEKLLENEETQINGFVLIENFKGFTMQHASGIKHT 217

  Fly   182 EFARIFKWGEQSLPMRHKEIHLINVPSTLKWLIDFVKNRVSSKMKNRLIIYGSEKE-LMKSVDQG 245
            |..::....:.|.|.|.|.:|:|:.|.......:.||..:.||:..|:.::|.|.: .::.....
Zfish   218 ELKKMVDMLQDSFPARFKAVHVIHQPWYFTTTYNVVKPFMKSKLLERVFVHGDELDGYLRDFGAE 282

  Fly   246 CLPLEMGGKVP 256
            .||.:..|..|
Zfish   283 ILPPDFDGTGP 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CralbpNP_523939.1 CRAL_TRIO_N 31..78 CDD:215024 16/56 (29%)
SEC14 101..254 CDD:238099 42/153 (27%)
rlbp1aNP_956999.1 CRAL_TRIO_N 59..116 CDD:215024 16/56 (29%)
CRAL_TRIO 142..291 CDD:279044 41/148 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 142 1.000 Inparanoid score I4453
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559280at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8419
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10174
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X106
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 1 1.500 - -
88.470

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