DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cralbp and Clvs1

DIOPT Version :10

Sequence 1:NP_523939.1 Gene:Cralbp / 38651 FlyBaseID:FBgn0035636 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_001102439.1 Gene:Clvs1 / 366311 RGDID:1564200 Length:354 Species:Rattus norvegicus


Alignment Length:289 Identity:76/289 - (26%)
Similarity:134/289 - (46%) Gaps:13/289 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 GLPEALLKIAKRELREDRCTREQSLEQLRNWVAKNEDLQNVRCDDTFLLRFLRAKKFSVPMAEQT 74
            ||....::.|:.||.|:.....|.::|:|:.:....|:..:|.||.|:||||||:||....|.:.
  Rat    29 GLSPDTIEKARLELNENPDVLHQDIQQVRDMIITRPDIGFLRTDDAFILRFLRARKFHQADAFRL 93

  Fly    75 LLKYLNIRRTFPHMSTQLDYLEPRLGDLIDQGYIFAVPQRDKHGRRVVVINAKGLNPKIHTSCDQ 139
            |.:|...|:....|.......:|.:...:..|:...:..||.:||:::::.|...:...::..|.
  Rat    94 LAQYFQYRQLNLDMFKNFKADDPGIKRALIDGFPGVLENRDHYGRKILLLFAANWDQSRNSFTDI 158

  Fly   140 AKAHFLTYECLMEDQETQITGLTHVGDFAGVTTAHVTNWNPTEFARIFKWGEQSLPMRHKEIHLI 204
            .:|..|:.|.|:||.|.||.|...:.|::..:....:...|:......:..:.|.|.|...:|.:
  Rat   159 LRAILLSLEVLIEDPELQINGFILIIDWSNFSFKQASKLTPSILKLAIEGLQDSFPARFGGVHFV 223

  Fly   205 NVPSTLKWLIDFVKNRVSSKMKNRLIIYGSE-KELMKSVDQGCLPLEMGGKVPMREMIELWKQEL 268
            |.|..:..|...:|..:..|.:.|:.::|:. ..|.:.:....||.|.||.:|..:| ..|.:.|
  Rat   224 NQPWYIHALYTLIKPFLKDKTRKRIFLHGNNLNSLHQLIHPEFLPSEFGGTLPPYDM-GTWARTL 287

  Fly   269 ATKRDLILGLDKSILRSDRGIQRRSSFNA 297
                   ||.|    .||......:|:||
  Rat   288 -------LGPD----YSDENDYTHTSYNA 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CralbpNP_523939.1 CRAL_TRIO_N 31..78 CDD:215024 18/46 (39%)
SEC14 106..254 CDD:469559 35/148 (24%)
Clvs1NP_001102439.1 CRAL_TRIO_N 51..97 CDD:215024 18/45 (40%)
SEC14 123..274 CDD:469559 35/150 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 317..354
Blue background indicates that the domain is not in the aligned region.

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