DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cralbp and Clvs1

DIOPT Version :9

Sequence 1:NP_523939.1 Gene:Cralbp / 38651 FlyBaseID:FBgn0035636 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_001102439.1 Gene:Clvs1 / 366311 RGDID:1564200 Length:354 Species:Rattus norvegicus


Alignment Length:289 Identity:76/289 - (26%)
Similarity:134/289 - (46%) Gaps:13/289 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 GLPEALLKIAKRELREDRCTREQSLEQLRNWVAKNEDLQNVRCDDTFLLRFLRAKKFSVPMAEQT 74
            ||....::.|:.||.|:.....|.::|:|:.:....|:..:|.||.|:||||||:||....|.:.
  Rat    29 GLSPDTIEKARLELNENPDVLHQDIQQVRDMIITRPDIGFLRTDDAFILRFLRARKFHQADAFRL 93

  Fly    75 LLKYLNIRRTFPHMSTQLDYLEPRLGDLIDQGYIFAVPQRDKHGRRVVVINAKGLNPKIHTSCDQ 139
            |.:|...|:....|.......:|.:...:..|:...:..||.:||:::::.|...:...::..|.
  Rat    94 LAQYFQYRQLNLDMFKNFKADDPGIKRALIDGFPGVLENRDHYGRKILLLFAANWDQSRNSFTDI 158

  Fly   140 AKAHFLTYECLMEDQETQITGLTHVGDFAGVTTAHVTNWNPTEFARIFKWGEQSLPMRHKEIHLI 204
            .:|..|:.|.|:||.|.||.|...:.|::..:....:...|:......:..:.|.|.|...:|.:
  Rat   159 LRAILLSLEVLIEDPELQINGFILIIDWSNFSFKQASKLTPSILKLAIEGLQDSFPARFGGVHFV 223

  Fly   205 NVPSTLKWLIDFVKNRVSSKMKNRLIIYGSE-KELMKSVDQGCLPLEMGGKVPMREMIELWKQEL 268
            |.|..:..|...:|..:..|.:.|:.::|:. ..|.:.:....||.|.||.:|..:| ..|.:.|
  Rat   224 NQPWYIHALYTLIKPFLKDKTRKRIFLHGNNLNSLHQLIHPEFLPSEFGGTLPPYDM-GTWARTL 287

  Fly   269 ATKRDLILGLDKSILRSDRGIQRRSSFNA 297
                   ||.|    .||......:|:||
  Rat   288 -------LGPD----YSDENDYTHTSYNA 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CralbpNP_523939.1 CRAL_TRIO_N 31..78 CDD:215024 18/46 (39%)
SEC14 101..254 CDD:238099 35/153 (23%)
Clvs1NP_001102439.1 CRAL_TRIO_N 51..97 CDD:215024 18/45 (40%)
CRAL_TRIO 125..274 CDD:395525 35/148 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 317..354
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 144 1.000 Inparanoid score I4343
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559280at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10174
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X106
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.070

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