DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cralbp and ttpa

DIOPT Version :9

Sequence 1:NP_523939.1 Gene:Cralbp / 38651 FlyBaseID:FBgn0035636 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_956025.2 Gene:ttpa / 325906 ZFINID:ZDB-GENE-030131-4631 Length:285 Species:Danio rerio


Alignment Length:287 Identity:75/287 - (26%)
Similarity:131/287 - (45%) Gaps:27/287 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 VQDQGETTGLPEALLKIAK--RELREDRCTREQSLEQLRNWVAKNEDLQNVRCDDTFLLRFLRAK 64
            |.:..|...||....:||.  .||      :|::..:||        ::::....|||:|||:|:
Zfish     6 VDETEELNNLPVDSSRIAPYLSEL------KEKAEAELR--------IRDLDLSKTFLIRFLQAR 56

  Fly    65 KFSVPMAEQTLLKYLNIRRTFPHMSTQLDYLEPR--LGDLIDQGYIFAVPQRDKHGRRVVVINAK 127
            .|.|.:|.:.|:.|...|:..|.::..   |.|.  :| |:...|...:..||..|.||::....
Zfish    57 DFDVALALKLLINYHKWRQECPEITAD---LRPSSVIG-LLQNNYHGVLRSRDDAGSRVLIYRIG 117

  Fly   128 GLNPKIHTSCDQAKAHFLTYECLMEDQETQITGLTHVGDFAGVTTAHVTNWNPTEFARIFKWGEQ 192
            ..|||..|:.:..:...:|.|.::::.|||..||..:.|......||....||:...:|......
Zfish   118 KWNPKEFTAYEVFRVSLITSELIVQEWETQRNGLKAIFDLQDWCFAHALQINPSLAKKISSVLTD 182

  Fly   193 SLPMRHKEIHLINVPSTLKWLIDFVKNRVSSKMKNRLIIYGSE--KELMKSVDQGCLPLEMGGKV 255
            |.|::.:.|||||.|...:.:...::..:..|:|.|:.::|..  :.|.....:..||...||..
Zfish   183 SFPLKVRGIHLINEPIFFRPVFAMIRPFLPDKIKQRIHMHGCSYARSLCNYFPKAVLPPVYGGTG 247

  Fly   256 P-MREMIELWKQELATKRDLI--LGLD 279
            | :.|:.:.|.:.:....|.:  |.:|
Zfish   248 PSVDEVCQEWTEYIMQSEDYLHRLSVD 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CralbpNP_523939.1 CRAL_TRIO_N 31..78 CDD:215024 14/46 (30%)
SEC14 101..254 CDD:238099 40/154 (26%)
ttpaNP_956025.2 CRAL_TRIO_N 26..70 CDD:215024 16/57 (28%)
CRAL_TRIO 97..246 CDD:279044 39/148 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1471
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559280at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X106
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.820

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