DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cralbp and cgr-1

DIOPT Version :9

Sequence 1:NP_523939.1 Gene:Cralbp / 38651 FlyBaseID:FBgn0035636 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_508618.2 Gene:cgr-1 / 180650 WormBaseID:WBGene00020847 Length:383 Species:Caenorhabditis elegans


Alignment Length:269 Identity:57/269 - (21%)
Similarity:89/269 - (33%) Gaps:97/269 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    77 KYLNIRRTFPHMSTQLDYLEPRLG-----DLIDQGYIFAVPQRDKHGRRVVVINAKGLNPKIHTS 136
            |..:|..|:|...|....|...:|     |:|.....:||.         .::|. |:|.|..||
 Worm    27 KTKDILATYPEYDTDFSLLRWLMGWDYKIDVIVPKMRYAVE---------TLVNL-GMNNKQTTS 81

  Fly   137 CDQ----------------------------------AKAHFLTYE-----------CLME---- 152
            .||                                  ||||..|..           |:.|    
 Worm    82 VDQINRDIKNMSAVAEYFPGGIMGKSKRGDVVYMQAMAKAHPKTLVKAGPTSQLFQLCISETEMS 146

  Fly   153 -------DQETQ-ITGLTHVGDFAGVTTAHVTNWNPT--EFARIFKWGEQSLPMRHKEIHLINVP 207
                   :|||: ..|:..:.|..|.:...:  :.||  .:..:....:...|...:.|::||.|
 Worm   147 FKIIRQTEQETERKMGVIIIMDLDGFSMDLL--YTPTLKVYMSLLTMLQNIFPDFARRIYIINCP 209

  Fly   208 STLKWLIDFVKNRVSSK-----------MKNRLIIYGSEKEL------MKSVDQGCLPLEMGGKV 255
            :.:..:...|...:||:           .||.||....|:.:      :|..:..|..:.|||||
 Worm   210 AMMSAVYAMVSPVLSSQTREKVRFLDKDWKNHLIEEIGEENIFMHWGGVKKHEHPCGDIRMGGKV 274

  Fly   256 PMREMIELW 264
            |.    .||
 Worm   275 PE----SLW 279

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity