DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cralbp and C34C12.6

DIOPT Version :10

Sequence 1:NP_523939.1 Gene:Cralbp / 38651 FlyBaseID:FBgn0035636 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_497717.2 Gene:C34C12.6 / 175452 WormBaseID:WBGene00007925 Length:400 Species:Caenorhabditis elegans


Alignment Length:194 Identity:41/194 - (21%)
Similarity:73/194 - (37%) Gaps:26/194 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 SCDQAKAHFLTYECLMEDQETQITGLTHVGDFAGVTTAHVTNWNPTEFARIFKWGEQSLPMRHKE 200
            |.|:....|:    ::.|..|     .::.|:....:.::..|.    .|...| :...|...:.
 Worm   160 SADKGPVQFI----VIFDLNT-----VNITDYVNPMSGYMKLWQ----IRSELW-QDWFPEMVQR 210

  Fly   201 IHLINVPSTLKWLIDFVKNRVSSKMKNRLIIYGSEKELM-KSVDQGCLPLEMGGK----VPMREM 260
            |:|.|.|..|..|....:..:|.:...|:.|...:.:|. |.:....:|.|.||:    ||..:.
 Worm   211 IYLTNPPRLLGLLWKVARVFLSEENLKRIEIISDKSDLAGKFLPPWLVPKEYGGEFVNTVPPGDE 275

  Fly   261 IELWKQELATKRDLILGLDKSILRSDRGIQRRSSFNAGKASTGGPNFVSQIESIEGSFRKLEFD 324
            ..:..:...|..|.......   ..:.||.|..|  :.|..:....||.:|:...|  :||.:|
 Worm   276 TGVSVRRKITSADYYKPYQH---YKEHGIDRPKS--SHKDVSPAEKFVFKIQVPNG--KKLLWD 332

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CralbpNP_523939.1 CRAL_TRIO_N 31..78 CDD:215024
SEC14 106..254 CDD:469559 24/118 (20%)
C34C12.6NP_497717.2 SEC14 91..265 CDD:214706 24/118 (20%)
Blue background indicates that the domain is not in the aligned region.

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