DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cralbp and ctg-1

DIOPT Version :9

Sequence 1:NP_523939.1 Gene:Cralbp / 38651 FlyBaseID:FBgn0035636 Length:324 Species:Drosophila melanogaster
Sequence 2:NP_491993.1 Gene:ctg-1 / 172431 WormBaseID:WBGene00010370 Length:383 Species:Caenorhabditis elegans


Alignment Length:272 Identity:55/272 - (20%)
Similarity:108/272 - (39%) Gaps:75/272 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 EQSLEQLRNWVAKNEDLQNVRCDDTFLLRFLRAKKFSVPMAEQTLLKYLNIRRTFPHMS-----T 90
            :|::..||:.|.:.::|     :|.::||:||||:.......::|.|::..|..: |:.     |
 Worm    14 QQTIRDLRSIVPQIDNL-----NDGYVLRWLRAKEGRFDETAESLKKHVTFRNAW-HLDKIEQWT 72

  Fly    91 QLDYLEPRLGDLIDQGYIFAVPQRDKHGRRVVV-----INAKGLNPKIHTSCDQAKAHFLTYECL 150
            ..:.||...|    .|.:     .|..||.:::     ::.:||...: .|.|..|......|..
 Worm    73 PPECLEKYCG----YGLL-----GDTEGRPILMSLLGNVDVEGLLRSV-ASLDYIKFSLAAIEKG 127

  Fly   151 ME--DQETQITG-----LTHVGDFAGVTTAHVT-NWNPTEFARIFKWGEQSLPMRHKEIHLINVP 207
            |:  :::.:.:|     :|.|.|...:|:||.: ....:.|..:....:...|:..::|.:|..|
 Worm   128 MKLCEEKAKESGRPFEQMTLVFDLENITSAHFSCKQFASSFTTLVSLFQDHYPLFLRKILIIRAP 192

  Fly   208 STLKWLIDFVKNRVSSKMKNRLIIYGSEKELMKSVDQGCLPLEMGGKVPMREMIEL-----WKQE 267
            ...:                  |.|.|...:::.              |:..::|:     ||..
 Worm   193 EMAR------------------IAYASITAILQD--------------PITRLVEMPSESDWKWS 225

  Fly   268 LATKRDLILGLD 279
            ||.    |:.||
 Worm   226 LAQ----IVNLD 233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CralbpNP_523939.1 CRAL_TRIO_N 31..78 CDD:215024 13/46 (28%)
SEC14 101..254 CDD:238099 26/165 (16%)
ctg-1NP_491993.1 SEC14 73..244 CDD:214706 38/207 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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