DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myt1 and Nek3

DIOPT Version :9

Sequence 1:NP_647987.2 Gene:Myt1 / 38649 FlyBaseID:FBgn0040298 Length:533 Species:Drosophila melanogaster
Sequence 2:XP_006253421.1 Gene:Nek3 / 306576 RGDID:1307419 Length:471 Species:Rattus norvegicus


Alignment Length:282 Identity:77/282 - (27%)
Similarity:122/282 - (43%) Gaps:54/282 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 LAKLGEGSFGEVFQVRDRSDGQLYAVKISKQLFRGEQYRAERLEEVRRYEEFSGHENC------- 162
            |..:|.||||.|....::|..|.:|:|                 |:|..:.||..:||       
  Rat     7 LRVIGHGSFGSVLLATEKSSNQTFAMK-----------------EIRLLKSFSDVQNCRKEAVLL 54

  Fly   163 --------IRFIRAWEQYDRLYMQMELC-----RESLEQYLLRCQRIPEERIWHILLDLLRGLKS 214
                    :.|..::|....||:.||.|     .:.::|.  :.:..||:.:.:..:.:..|:..
  Rat    55 AKMKHPNIVAFKESFEAEGHLYIVMEYCDGGDLTQRIKQQ--KGKLFPEDTVLNWFIQICLGVNH 117

  Fly   215 LHDRNLIHLDIKLDNVLIGEDDETCKLADFGLVIDVDRANSHHAT-EGDSRYMAPEILQG-HFSK 277
            :|.|.::|.|||..||.:..|.:. ||.|||....:....:...| .|...|:.|||.:. .::.
  Rat   118 IHKRRVLHRDIKSKNVFLTHDGKV-KLGDFGSARLLSSPMAFARTYVGTPYYVPPEIWENLPYNN 181

  Fly   278 AADIFSLGIAMLELACYMDLPSNGPLWHELRHGI-------LPEEFINKISLELQSVIKSMMKPD 335
            .:||:|||..:.|| |.:..|.....|..|...|       ||..:.:|    ||.::|.|:|.:
  Rat   182 KSDIWSLGCILYEL-CALKHPFQANSWKNLILKICQGPIHPLPALYSSK----LQCLVKQMLKRN 241

  Fly   336 PAQRPTAEQLLSHPKLQYLQKK 357
            |..||:|..||....|..|..|
  Rat   242 PVHRPSATTLLCRGSLAPLVLK 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myt1NP_647987.2 PKc_Myt1 100..349 CDD:270952 74/272 (27%)
Pkinase 102..349 CDD:278497 74/272 (27%)
Nek3XP_006253421.1 PKc_like 3..257 CDD:304357 74/274 (27%)
S_TKc 4..252 CDD:214567 72/269 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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