DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myt1 and cdkl-1

DIOPT Version :9

Sequence 1:NP_647987.2 Gene:Myt1 / 38649 FlyBaseID:FBgn0040298 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_001256289.1 Gene:cdkl-1 / 189841 WormBaseID:WBGene00012779 Length:484 Species:Caenorhabditis elegans


Alignment Length:480 Identity:113/480 - (23%)
Similarity:190/480 - (39%) Gaps:102/480 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 LNRSQSLGSCSTNSSQIAHAISFRDAGCSDSSTLP----SSP----------VQAELSTLSL--- 95
            :..|.:|.|...||..:..:...||...|..::|.    |:|          |.||:..|::   
 Worm    51 IETSDTLCSSKENSLLLTSSDISRDPSKSPLNSLNRKKLSAPRLEKTKSDDMVFAEIEALTVMEN 115

  Fly    96 --------SHFEQC-----FERLAKLGEGSFGEVFQVRDRSDGQLYAVKISKQLFRGEQYRAERL 147
                    |...:|     ::||:||||||:|.|::.::|..||:.|:|...:.......:...|
 Worm   116 NLFCSLRNSSKRRCEAMDKYDRLSKLGEGSYGVVYKCKNRDTGQIVAIKKFVETEDDPHIKKIAL 180

  Fly   148 EEVRRYEEFSGHENCIRFIRAWEQYDRLYMQMELC-RESLEQYLLRCQRIPEERIWHILLDLLRG 211
            .|:|..::.. |:|.:..|..:::..:|::..||| |..|.:.......:.:|.|..|:..||..
 Worm   181 REIRMLKQLK-HQNLVGLIEVFKRNRKLHLVFELCDRTVLHELEKNPHGVNDELIKKIIYQLLEA 244

  Fly   212 LKSLHDRNLIHLDIKLDNVLIGEDDETCKLADFGLVIDVDRANSHHATEGDSRYMAPEILQG--H 274
            ||..|....||.|:|.:|:.:..:|:. ||.|||....::....:........|.:||:|.|  .
 Worm   245 LKFCHSHKCIHRDVKPENIFLTRNDQV-KLGDFGFARIINTTEMYTDYVATRWYRSPELLVGDVQ 308

  Fly   275 FSKAADIFSLGIAMLELACYMDLPSNGPLW------HELRH------GILPEEF----INKISLE 323
            :....||:::|      ..|.:|.:...||      .:|.|      ..||...    .|:....
 Worm   309 YGPPVDIWAVG------CVYAELLTGEALWPGRSDIDQLYHIRKTLGEFLPRHISIFRTNQFFFG 367

  Fly   324 LQSVIKSMMKPDPAQRPTAEQLLSHPKLQYLQKKRKSLMNFSML-SRSFRRSRRAVWGRMCNWKT 387
            |.......::|.|::.|.|    |..:|.:|||      .|.|. .|.|..|...:.|...||  
 Worm   368 LSIPEPEHLEPLPSKLPNA----SSAQLDFLQK------CFEMSPDRRFSCSELMLHGIFSNW-- 420

  Fly   388 AAFRYLLYFLEVLHLCKPITASQPNINIVPSSPSSKGVPLVPQVEFQLVGSTPIANRDCYASDFL 452
                       :|.:.:.        ...|:..:||..|          ...|:.|.:  :::.:
 Worm   421 -----------ILRIRQD--------ESTPTGLTSKRSP----------NYLPLLNGN--SNNLV 454

  Fly   453 SGEDPLDLSNQGSPNVINSTPLNTN 477
            |....|...|.|:.| .|...:|.|
 Worm   455 SKNFSLQGGNHGNNN-NNGNGINRN 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myt1NP_647987.2 PKc_Myt1 100..349 CDD:270952 70/272 (26%)
Pkinase 102..349 CDD:278497 69/265 (26%)
cdkl-1NP_001256289.1 STKc_CDKL1_4 133..417 CDD:270837 79/301 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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