DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myt1 and gck-4

DIOPT Version :9

Sequence 1:NP_647987.2 Gene:Myt1 / 38649 FlyBaseID:FBgn0040298 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_001360654.1 Gene:gck-4 / 181488 WormBaseID:WBGene00007287 Length:1232 Species:Caenorhabditis elegans


Alignment Length:485 Identity:114/485 - (23%)
Similarity:196/485 - (40%) Gaps:108/485 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   105 LAKLGEGSFGEVFQVRDRSDGQLYAVKISKQLFRGEQYRAERLEEVRRYEEFSGHENCIRFIRAW 169
            :.:||:|:||:|.:...|:|.:|:|...|.::..||:.. :.|.|:....|..||...:.....:
 Worm    37 IGELGDGAFGKVEKAVSRTDPKLFAASKSIEIQEGEELE-DFLVEIEILSECKGHPVMLGLYSTY 100

  Fly   170 EQYDRLYMQMELC-RESLEQYLLRCQRI-PEERIWHILLDLLRGLKSLHDRNLIHLDIKLDNVLI 232
            ...::|.|.:|.| ..:::..::....: .|::|.:|...:...||.||.:|:||.|:|..|:|:
 Worm   101 FFENKLTMLLEFCGGGAVDNIIVELGHVLKEDQIRYIGYYVCDALKWLHSQNVIHRDLKAGNILL 165

  Fly   233 GEDDETCKLADFGLVIDVDRANSHHAT-EGDSRYMAPEILQGHFSK------AADIFSLGIAMLE 290
            .:|.:. :|||||:...:........| .|...:||||::.....|      .:||:|.||.::|
 Worm   166 TQDGQV-RLADFGVSAKLKSEREKRDTFIGTPYWMAPEVMACETFKDQPYDCISDIWSFGITLIE 229

  Fly   291 LACYMDLPSNGPLWHELRHGILPEEFIN--KISLELQ-SVIKSMMKP-----------------D 335
            :|                .|..|...::  ::.:::| |...::::|                 |
 Worm   230 MA----------------QGEPPHSDVSVMRVIIKVQKSEPPTLLQPSHWTRSFSDILTRCLVKD 278

  Fly   336 PAQRPTAEQLLSHPKLQYLQKKRKSLMNF------------------SMLSRSFRRSRRAVWGRM 382
            |..||.|.::..|...|....|||.:|:.                  ..::.|...|:|    |.
 Worm   279 PRNRPPAAEIFKHQWFQNAPSKRKMIMDLLAEMYADVQEEVVIDGDEESVAGSDEISQR----RG 339

  Fly   383 CNWKTAA----------FRYLLYFLEVLHLCKPIT-----ASQP---NINIVPSSPSSKGVPLVP 429
            .:|.:|:          |:..:..:.::....|.|     |:.|   .:|....||...|.|...
 Worm   340 DSWSSASDSPRPATSDGFKVPIVSVPIIETPPPDTPHKKRAAPPPPQEVNAHRQSPVVNGKPAEN 404

  Fly   430 Q--VEFQLVG-----------STPIANRDCYASDFLSGEDPLDLSNQGSPNVINSTPLNTNQGKS 481
            .  .||....           |||..|:   :|..||....|.|:..|||:..|.......:..|
 Worm   405 SSFAEFSFSNSNTSSEGTAEFSTPSTNK---SSAQLSTPAVLSLNTSGSPSSANEFVSPRREALS 466

  Fly   482 RLDLLKNNV-DSMGRYVHVHDFESPCSALS 510
            .||.|...: |..|...    |.||.|:.|
 Worm   467 ILDELTTTLDDEQGSTF----FNSPRSSAS 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myt1NP_647987.2 PKc_Myt1 100..349 CDD:270952 66/272 (24%)
Pkinase 102..349 CDD:278497 66/272 (24%)
gck-4NP_001360654.1 STKc_SLK_like 28..310 CDD:132942 72/290 (25%)
PKK 862..995 CDD:372134
PKK 1027..1170 CDD:372134
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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