DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment scny and UBP9

DIOPT Version :10

Sequence 1:NP_729092.1 Gene:scny / 38648 FlyBaseID:FBgn0260936 Length:1038 Species:Drosophila melanogaster
Sequence 2:NP_011024.1 Gene:UBP9 / 856835 SGDID:S000000900 Length:754 Species:Saccharomyces cerevisiae


Alignment Length:497 Identity:105/497 - (21%)
Similarity:187/497 - (37%) Gaps:118/497 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 LGGNSSAGSSTDQAKSGEDTNGSLQN----HIVANAKRILMAKIEYEEVPNYHESVLENLKSKYI 82
            :|......:..|.||  :|.|..::.    |.|..|...|..|:        ||.      .|.|
Yeast   247 MGFGKDKSNYKDSAK--KDDNNEMERPQPVHTVVMASDTLTEKL--------HEG------CKKI 295

  Fly    83 VIKPGNPGAINGFSGKNNTGKLVGANGH---DNNGARKQA------EHPNNQSHHINHHNHQHPT 138
            ::  |.|......|....:.....||.|   |:.|:|..:      .:|.:.:..:|:.|:....
Yeast   296 IV--GRPLLKQSDSLSKASTTDCQANSHCQCDSQGSRITSVDDDVLVNPESCNDAVNNSNNNKEN 358

  Fly   139 SNPNELPKPKRVLYPRENIRIGWKQSERKWQVGTGMINVGNTCYLNSTLQALLHIPALANWLVSE 203
            :.|....:.|..|                  :...::||.:..|                  .:|
Yeast   359 TFPTSEQRKKAAL------------------IRGPVLNVDHLLY------------------PTE 387

  Fly   204 QAHLADCNVAEPGSGCIICAMTKTLLATQSNQSAVRP--FLIYSKLKQICKHMVVGRQEDAHEFL 266
            :|.|.:      |...|..::|:.|..|    ..|.|  |:...|.:.:..:.::  |:||||||
Yeast   388 EATLYN------GLKDIFESITENLSLT----GIVSPTEFVKILKKENVLFNTMM--QQDAHEFL 440

  Fly   267 RFLVEAMERAYL------MRFRNYK---ELDQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQ 322
            .||:..... |:      |||...|   ..|..:.:      :|.|.|.:.::||:|::::...:
Yeast   441 NFLLNDFSE-YIQRNNPRMRFGPQKTDNSNDNFITD------LFKGTLTNRIKCLTCDNITSRDE 498

  Fly   323 HFQDLLLDIR--KADSLEDAFEGHFSRERLEDMG-YKCEGCKKKVSATKQFSLERAPITLCIQLK 384
            .|.|..::::  :...::...:.:..||.|..:. :.|..|.....|.:...|::.|..|.:.||
Yeast   499 PFLDFPIEVQGDEETDIQKMLKSYHQREMLNGVNKFYCNKCYGLQEAERMVGLKQLPHILSLHLK 563

  Fly   385 RFSMIGN-----KLTKQISFKSRIDLSKYAARSQAAQAQPLTYRLVSMVTHLGASQHCGHYTAIG 444
            ||.....     ||..:|.:...:|:|.....|...:     |.|..:|.|:|:....|||..|.
Yeast   564 RFKYSEEQKSNIKLFNKILYPLTLDVSSTFNTSVYKK-----YELSGVVIHMGSGPQHGHYVCIC 623

  Fly   445 STDTGSFYNFDDSYVRPIAMHSVC--------NTNAYIMFFE 478
            ..:...:..:||..|..|...:|.        .|.||::|::
Yeast   624 RNEKFGWLLYDDETVESIKEETVLQFTGHPGDQTTAYVLFYK 665

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scnyNP_729092.1 Peptidase_C19E 171..477 CDD:239126 74/332 (22%)
UBP9NP_011024.1 COG5533 135..>215 CDD:444284
Peptidase_C19 135..>154 CDD:470612
Peptidase_C19 390..665 CDD:470612 70/298 (23%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.