DRSC/TRiP Functional Genomics Resources

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Protein Alignment scny and UBP8

DIOPT Version :10

Sequence 1:NP_729092.1 Gene:scny / 38648 FlyBaseID:FBgn0260936 Length:1038 Species:Drosophila melanogaster
Sequence 2:NP_013950.1 Gene:UBP8 / 855263 SGDID:S000004836 Length:471 Species:Saccharomyces cerevisiae


Alignment Length:335 Identity:98/335 - (29%)
Similarity:161/335 - (48%) Gaps:31/335 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   172 TGMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLADCNVAEPGSGCIICAMTK---------- 226
            :|:||:|:||:::|.||.|:|.|......:| |.|..:|.|..|.. |..||:.|          
Yeast   137 SGLINMGSTCFMSSILQCLIHNPYFIRHSMS-QIHSNNCKVRSPDK-CFSCALDKIVHELYGALN 199

  Fly   227 TLLATQSNQSAVRP----FLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFRNYKEL 287
            |..|:.|:.|..|.    :|:....| |.:::....|:|||||.:|::..:.::|::...|.||:
Yeast   200 TKQASSSSTSTNRQTGFIYLLTCAWK-INQNLAGYSQQDAHEFWQFIINQIHQSYVLDLPNAKEV 263

  Fly   288 DQLVKETTP--LGQIFGGYLRSEVRCLSC-NHVSITFQHFQDLLLDIRKADSLEDAFEGHFSRER 349
            .:...:...  :..:|.|.|.|.:.|..| |:...|...|.||.|||:....|.:..:....:|:
Yeast   264 SRANNKQCECIVHTVFEGSLESSIVCPGCQNNSKTTIDPFLDLSLDIKDKKKLYECLDSFHKKEQ 328

  Fly   350 LEDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGN----KLTKQISFKSRIDLSKYAA 410
            |:|..|.|..|.....|.||..:.:.|..|.:|||||..:.|    ||...|.|.:.:::..|.:
Yeast   329 LKDFNYHCGECNSTQDAIKQLGIHKLPSVLVLQLKRFEHLLNGSNRKLDDFIEFPTYLNMKNYCS 393

  Fly   411 ------RSQAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYVRPIAMHSVCN 469
                  .|:..:...:.|.|:.:|:|.|.... |||.|......|.::.|:||.|..|:...|..
Yeast   394 TKEKDKHSENGKVPDIIYELIGIVSHKGTVNE-GHYIAFCKISGGQWFKFNDSMVSSISQEEVLK 457

  Fly   470 TNAYIMFFEL 479
            ..||::|:.:
Yeast   458 EQAYLLFYTI 467

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scnyNP_729092.1 Peptidase_C19E 171..477 CDD:239126 97/331 (29%)
UBP8NP_013950.1 zf-UBP 46..108 CDD:460464
Peptidase_C19D 138..466 CDD:239125 98/331 (30%)
Blue background indicates that the domain is not in the aligned region.

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