DRSC/TRiP Functional Genomics Resources

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Protein Alignment scny and UBP12

DIOPT Version :10

Sequence 1:NP_729092.1 Gene:scny / 38648 FlyBaseID:FBgn0260936 Length:1038 Species:Drosophila melanogaster
Sequence 2:NP_012338.1 Gene:UBP12 / 853242 SGDID:S000003733 Length:1254 Species:Saccharomyces cerevisiae


Alignment Length:1053 Identity:188/1053 - (17%)
Similarity:347/1053 - (32%) Gaps:390/1053 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 TSNPNELPKPKRVLYPRENIRIGWKQSERKWQVG-------------TGMINVGNTCYLNSTLQA 189
            ||||::|.           |.|...:....|...             ||::|:|||||:||.||.
Yeast   328 TSNPSDLV-----------IEIKPIEGNHHWPSNYFAYNKLEPASGTTGLVNLGNTCYMNSALQC 381

  Fly   190 LLHIPALANWL--------VSEQAHLADCNVAEPGSGCIICAMTKTLLATQSNQSAVRPFLIYSK 246
            |:|||.|.::.        ::|:..|............::..:.:..::.....:|..|.:..|.
Yeast   382 LVHIPQLRDYFLYDGYEDEINEENPLGYHGYVARAFSDLVQKLFQNRMSIMQRNAAFPPSMFKST 446

  Fly   247 LKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFRNYKELDQLVKE------------------ 293
            :...........|:|:.|||.||::::          :::|::::|:                  
Yeast   447 IGHFNSMFSGYMQQDSQEFLAFLLDSL----------HEDLNRIIKKEYTEKPSLSPGDDVNDWN 501

  Fly   294 -----------------TTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADSLEDAF 341
                             .:.:..:|.|..:|.:.|..|.:|||||..:.|:.|.: ..|::.|  
Yeast   502 VVKKLADDTWEMHLKRNCSVITDLFVGMYKSTLYCPECQNVSITFDPYNDVTLPL-PVDTVWD-- 563

  Fly   342 EGHFSRERLEDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGNKLTKQISFKSRIDLS 406
                                   ...|.|.:...|:.|.::|.:.|             :.:||.
Yeast   564 -----------------------KTIKIFPMNSPPLLLEVELSKSS-------------TYMDLK 592

  Fly   407 KYAAR------------------------SQAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTD 447
            .|..:                        |..:.||.||.:                 ..|...|
Yeast   593 NYVGKMSGLDPNTLFGCEIFSNQIYVNYESTESNAQFLTLQ-----------------ELIKPAD 640

  Fly   448 TGSFYNF----DDSYVRPIAMHSVCNT-------NAYI----MFFELDLSQAASPAANR----PN 493
            ...||..    |:..:.|     |.||       ||.:    .|..|...:..:|.|.|    ..
Yeast   641 DVIFYELPVTNDNEVIVP-----VLNTRIEKGYKNAMLFGVPFFITLKEDELNNPGAIRMKLQNR 700

  Fly   494 GVRLTNGHSTTPVPAATVSSPSPTRF------IGPQLPAGGANGYTNGNAQKTAI---------- 542
            .|.|:.|:...|.|..     :.|.|      :..:.|......|.: ..|.|:|          
Yeast   701 FVHLSGGYIPFPEPVG-----NRTDFADAFPLLVEKYPDVEFEQYKD-ILQYTSIKVTDKDKSFF 759

  Fly   543 -----------QFKQQNQQSP-------QNGLQLGT---GKFQDTAKP-------------PLVG 573
                       ||...|:..|       |..|...|   .|.:|..|.             .|:.
Yeast   760 SIKILSVEKEQQFASNNRTGPNFWTPISQLNLDKATDIDDKLEDVVKDIYNYSSLVDCAEGVLMQ 824

  Fly   574 AHAKGEATSAPTANGNKSSSPSSNSSSNHKSINQQQYLPISSD-DEDIE--DEMKPRPTTAQLPS 635
            ...:|:...:...|.:|... |.:...|.:::...:.:..::| |||:|  |:::...:|.    
Yeast   825 VDDEGDTEGSEAKNFSKPFQ-SGDDEENKETVTNNENVNNTNDRDEDMELTDDVEEDASTE---- 884

  Fly   636 MPNMTENHTEPKAKSPVKIQV-KTP---------VKTPLKSLVPYESASEEEEAPLPNPRKRPSG 690
             |.:|:   :|:|...:|..: .||         :......|...|:.|:::.....||...|:.
Yeast   885 -PELTD---KPEALDKIKDSLTSTPFAILSMNDIIVCEWSELGSNEAFSDDKIYNWENPATLPNK 945

  Fly   691 EDSSESDQESGQTNGHSKTNGSHTNGSASSSVHVNNSKQKTDAIDEIFKSLKKSADSDEDDDEEE 755
            |                         ..::.:..:|:|::|..:|:..:...|            
Yeast   946 E-------------------------LENAKLERSNAKERTITLDDCLQLFSK------------ 973

  Fly   756 PSI-QLTNGWH-PQKQSQSQSKAPPSPKTPPSPAVIKSKTGIWKVTRNDEVDAIED----DVDV- 813
            |.| .||:.|: |..:...|:.........|...:|..|....:.:.:|::||..:    |:|: 
Yeast   974 PEILGLTDSWYCPTCKEHRQATKQIQLWNTPDILLIHLKRFESQRSFSDKIDATVNFPITDLDLS 1038

  Fly   814 --VVVEGSP-------------------------VKIPTPNKNHRNPFSSSKPSTDSPATPGAKR 851
              ||.:..|                         ||....||.:.  |..|:.:..:|       
Yeast  1039 RYVVYKDDPRGLIYDLYAVDNHYGGLGGGHYTAYVKNFADNKWYY--FDDSRVTETAP------- 1094

  Fly   852 QKLLNGSA-----LKSHQQPRVGNGYQSNATSNGSTINELLKQSYRGYGSPVLSWNGKPAEL--- 908
            :..:.|||     ::.|:.   |||..|      |.:.|::::|..||...:.....:..:|   
Yeast  1095 ENSIAGSAYLLFYIRRHKD---GNGLGS------SKLQEIIQKSRHGYDERIKKIYDEQMKLYEF 1150

  Fly   909 -----EKEL---LVDAREQRQ-------------------RDIDDDEENEMDRGRQRKV------ 940
                 |:::   :::..|..|                   .|.||:::.|.....:||:      
Yeast  1151 NKTDEEEDVSDDMIECNEDVQAPEYSNRSLEVGHIETQDCNDEDDNDDGERTNSGRRKLRLLKKV 1215

  Fly   941 -KSGSAKGNNASN 952
             |:.|..|:::::
Yeast  1216 YKNNSGLGSSSTS 1228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scnyNP_729092.1 Peptidase_C19E 171..477 CDD:239126 70/400 (18%)
UBP12NP_012338.1 UBP12 99..1111 CDD:227847 165/925 (18%)

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