DRSC/TRiP Functional Genomics Resources

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Protein Alignment scny and UBP16

DIOPT Version :10

Sequence 1:NP_729092.1 Gene:scny / 38648 FlyBaseID:FBgn0260936 Length:1038 Species:Drosophila melanogaster
Sequence 2:NP_567705.1 Gene:UBP16 / 828558 AraportID:AT4G24560 Length:1008 Species:Arabidopsis thaliana


Alignment Length:687 Identity:169/687 - (24%)
Similarity:277/687 - (40%) Gaps:148/687 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPVS-----MAVCETANVVNAALRESLGGNSSAGSSTDQAKSGE---------DTN--GSLQNHI 49
            :|:|     ::..:::|:.:..|.:|...:|..||.....|.||         :|.  ..|..|.
plant   398 LPISSSTDALSPLDSSNLSHVTLPKSKSASSENGSMLAPLKVGEVQLLASKASNTKKCADLMKHS 462

  Fly    50 VANAKRILMAKIEYEEVPNYHESVLENLKSKYIVIKPGNPGAINGFSG-KNNTGKLVGANGHDNN 113
            ...||.:               .||::.|....|::..|  :::|.|| |.:..|:|        
plant   463 PLGAKSV---------------RVLDHQKQNGAVVQHIN--SLHGRSGLKASVLKVV-------- 502

  Fly   114 GARKQAEHPNNQSHHINHHNHQHPTSNPNELPKPKRVLYPRE------NIRIGWKQSERKWQVGT 172
               .|...|.:::.....|.|              :.|:|.|      ..:|.::.        .
plant   503 ---DQWTRPKSENEMAGRHGH--------------KGLFPYEVFAKLYTYKIEFQP--------C 542

  Fly   173 GMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLADCNVAEPGSGCIICAMTKTLLATQSNQSA 237
            |:|||||:|:.|...|.|:..|.|..:.: :|.|...|...|.   |..|...|.::..:..:|.
plant   543 GLINVGNSCFANVVFQCLMFTPPLTTYFL-QQFHSRACTKKEQ---CFTCGFEKLVVKAKEEKSP 603

  Fly   238 VRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFRNYKELDQLVKETTPLGQIFG 302
            :.|..:.|:|:.|...:..|::|||||||||:|:.|:...:............:::||.:|..||
plant   604 LSPNGLLSQLQNIGIFLGNGKEEDAHEFLRFVVDTMQSVCIKASEYDMTKSSKLEDTTLIGLTFG 668

  Fly   303 GYLRSEVRCLSCNHVSITFQHFQDLLLDI-RKADSLEDAFEGHFSRERLED--MGYKCEGCKKKV 364
            |||||:::|:.|...|...:...||.::| ....:|:||.. .|:|..:.|  ..|:|..||...
plant   669 GYLRSKIKCMKCQVKSELREKMMDLTVEIDGDISTLDDALR-RFTRTEILDGENKYRCGSCKSYE 732

  Fly   365 SATKQFSLERAPITLCIQLKRFSMIG--NKLTKQISFKSRIDLSKYAARSQAAQAQPLTYRLVSM 427
            .|.|:..:...|..|.|.|||| ..|  .||.|.|.|...:||:.|.:   ....:...|:|..:
plant   733 RAKKKLKITEPPNVLTIALKRF-QAGKFGKLNKLIRFPETLDLAPYVS---GGSEKSHDYKLYGV 793

  Fly   428 VTHLGA--SQHCGHYTAIGSTDTGSFYNFDDSYVRPIAMHSVCNTNAYIMFFELDLSQAASPAAN 490
            :.||..  :...|||... ..:...:|..|||.|....:..:....||::|:          |..
plant   794 IVHLDVMNAAFSGHYVCY-IRNQNKWYKADDSTVVTSDVERILTKGAYMLFY----------ARC 847

  Fly   491 RPNGVRL--------TNGHSTTPVPAA--------TVSSPSPTRFIGPQLPAGGANGYTNGNAQK 539
            .|...||        :|..|..|:|.|        :||:.||.  :....|.||    .:||.|.
plant   848 TPTPPRLAVCTKTEASNKKSRVPLPKANEKSTISRSVSTSSPE--LSSNTPGGG----RSGNIQS 906

  Fly   540 TAIQFKQQNQQSPQNGLQLGTGKF---------------QDTAKPPLVGAH---AKGEA-TSAPT 585
            ....|::..:...::.....:..|               .|.....:.|.|   |.|:: |.:||
plant   907 FYSSFQRLQKILEEDSASDSSSLFDSNSDECSCSTDSTSMDDFADFIFGDHQGRAHGQSETPSPT 971

  Fly   586 ANGNKSS------SPSSNSSSNHKSINQQQYLPISSD 616
            ::.:.||      ||.|.||......::.| ||:..:
plant   972 SSSSSSSPPFTRRSPLSRSSPETYGTSRHQ-LPLGGE 1007

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scnyNP_729092.1 Peptidase_C19E 171..477 CDD:239126 94/312 (30%)
UBP16NP_567705.1 zf-MYND 74..111 CDD:460312
Peptidase_C19 541..845 CDD:470612 95/331 (29%)
Blue background indicates that the domain is not in the aligned region.

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