DRSC/TRiP Functional Genomics Resources

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Protein Alignment scny and UBP16

DIOPT Version :9

Sequence 1:NP_729092.1 Gene:scny / 38648 FlyBaseID:FBgn0260936 Length:1038 Species:Drosophila melanogaster
Sequence 2:NP_567705.1 Gene:UBP16 / 828558 AraportID:AT4G24560 Length:1008 Species:Arabidopsis thaliana


Alignment Length:687 Identity:169/687 - (24%)
Similarity:277/687 - (40%) Gaps:148/687 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPVS-----MAVCETANVVNAALRESLGGNSSAGSSTDQAKSGE---------DTN--GSLQNHI 49
            :|:|     ::..:::|:.:..|.:|...:|..||.....|.||         :|.  ..|..|.
plant   398 LPISSSTDALSPLDSSNLSHVTLPKSKSASSENGSMLAPLKVGEVQLLASKASNTKKCADLMKHS 462

  Fly    50 VANAKRILMAKIEYEEVPNYHESVLENLKSKYIVIKPGNPGAINGFSG-KNNTGKLVGANGHDNN 113
            ...||.:               .||::.|....|::..|  :::|.|| |.:..|:|        
plant   463 PLGAKSV---------------RVLDHQKQNGAVVQHIN--SLHGRSGLKASVLKVV-------- 502

  Fly   114 GARKQAEHPNNQSHHINHHNHQHPTSNPNELPKPKRVLYPRE------NIRIGWKQSERKWQVGT 172
               .|...|.:::.....|.|              :.|:|.|      ..:|.::.        .
plant   503 ---DQWTRPKSENEMAGRHGH--------------KGLFPYEVFAKLYTYKIEFQP--------C 542

  Fly   173 GMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLADCNVAEPGSGCIICAMTKTLLATQSNQSA 237
            |:|||||:|:.|...|.|:..|.|..:.: :|.|...|...|.   |..|...|.::..:..:|.
plant   543 GLINVGNSCFANVVFQCLMFTPPLTTYFL-QQFHSRACTKKEQ---CFTCGFEKLVVKAKEEKSP 603

  Fly   238 VRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFRNYKELDQLVKETTPLGQIFG 302
            :.|..:.|:|:.|...:..|::|||||||||:|:.|:...:............:::||.:|..||
plant   604 LSPNGLLSQLQNIGIFLGNGKEEDAHEFLRFVVDTMQSVCIKASEYDMTKSSKLEDTTLIGLTFG 668

  Fly   303 GYLRSEVRCLSCNHVSITFQHFQDLLLDI-RKADSLEDAFEGHFSRERLED--MGYKCEGCKKKV 364
            |||||:::|:.|...|...:...||.::| ....:|:||.. .|:|..:.|  ..|:|..||...
plant   669 GYLRSKIKCMKCQVKSELREKMMDLTVEIDGDISTLDDALR-RFTRTEILDGENKYRCGSCKSYE 732

  Fly   365 SATKQFSLERAPITLCIQLKRFSMIG--NKLTKQISFKSRIDLSKYAARSQAAQAQPLTYRLVSM 427
            .|.|:..:...|..|.|.|||| ..|  .||.|.|.|...:||:.|.:   ....:...|:|..:
plant   733 RAKKKLKITEPPNVLTIALKRF-QAGKFGKLNKLIRFPETLDLAPYVS---GGSEKSHDYKLYGV 793

  Fly   428 VTHLGA--SQHCGHYTAIGSTDTGSFYNFDDSYVRPIAMHSVCNTNAYIMFFELDLSQAASPAAN 490
            :.||..  :...|||... ..:...:|..|||.|....:..:....||::|:          |..
plant   794 IVHLDVMNAAFSGHYVCY-IRNQNKWYKADDSTVVTSDVERILTKGAYMLFY----------ARC 847

  Fly   491 RPNGVRL--------TNGHSTTPVPAA--------TVSSPSPTRFIGPQLPAGGANGYTNGNAQK 539
            .|...||        :|..|..|:|.|        :||:.||.  :....|.||    .:||.|.
plant   848 TPTPPRLAVCTKTEASNKKSRVPLPKANEKSTISRSVSTSSPE--LSSNTPGGG----RSGNIQS 906

  Fly   540 TAIQFKQQNQQSPQNGLQLGTGKF---------------QDTAKPPLVGAH---AKGEA-TSAPT 585
            ....|::..:...::.....:..|               .|.....:.|.|   |.|:: |.:||
plant   907 FYSSFQRLQKILEEDSASDSSSLFDSNSDECSCSTDSTSMDDFADFIFGDHQGRAHGQSETPSPT 971

  Fly   586 ANGNKSS------SPSSNSSSNHKSINQQQYLPISSD 616
            ::.:.||      ||.|.||......::.| ||:..:
plant   972 SSSSSSSPPFTRRSPLSRSSPETYGTSRHQ-LPLGGE 1007

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scnyNP_729092.1 Peptidase_C19E 171..477 CDD:239126 94/312 (30%)
UCH 172..477 CDD:278850 94/311 (30%)
Asp-B-Hydro_N <617..>731 CDD:191249 169/687 (25%)
UBP16NP_567705.1 zf-MYND 74..111 CDD:396356
Peptidase_C19 541..845 CDD:351799 95/331 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1865
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000177
OrthoInspector 1 1.000 - - otm2471
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.810

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