DRSC/TRiP Functional Genomics Resources

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Protein Alignment scny and UBP25

DIOPT Version :9

Sequence 1:NP_729092.1 Gene:scny / 38648 FlyBaseID:FBgn0260936 Length:1038 Species:Drosophila melanogaster
Sequence 2:NP_566486.1 Gene:UBP25 / 820662 AraportID:AT3G14400 Length:661 Species:Arabidopsis thaliana


Alignment Length:692 Identity:196/692 - (28%)
Similarity:300/692 - (43%) Gaps:149/692 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 IRIGWKQS----ERKWQVGTGMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLADCNVAEPGS 217
            :::.|..|    :|:.....|:.|:||||||||.||.|...|.|||:.::.: |.:.|:....|.
plant     5 LQMSWMPSLLSQKRRNGPPLGLRNLGNTCYLNSVLQCLTFTPPLANFCLTHK-HSSHCDTYVDGE 68

  Fly   218 ---GCIICAMTKTLLATQS-NQSAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYL 278
               .|..|.:.|.:..:.| :.:...|..|.|.||...:|..:|||||||||||::::|.....|
plant    69 RKRDCPFCIVEKRIARSLSVDLTTDAPNKISSCLKIFAEHFKLGRQEDAHEFLRYVIDACHNTSL 133

  Fly   279 ----MRFRNYKEL--DQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADSL 337
                :|:...:..  :.:|||      ||||.|:|:|:||||...|.......|:.|:|.::.|:
plant   134 RLKKLRYNGNEPFNGNSVVKE------IFGGALQSQVKCLSCGAESNKADEIMDISLEILQSSSV 192

  Fly   338 EDAFEGHFSRERLE-DMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRF-SMIGNKLTKQISFK 400
            :::.:..|..|.|: :..|:||.|:|.|:|.||.|:.:||..|.|||||| .:.|.|:.|.|||.
plant   193 KESLQKFFQSEILDGNNKYRCESCEKLVTARKQMSILQAPNILVIQLKRFGGIFGGKIDKAISFG 257

  Fly   401 SRIDLSKYAARSQAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYVRPIAMH 465
            ..:.||.:.::: :...|| .|:|..::.|.|.|...|||.|......|.:|..:||:|....:.
plant   258 EILVLSNFMSKA-SKDPQP-EYKLFGIIVHSGFSPESGHYYAYVKDSLGRWYCCNDSFVSLSTLQ 320

  Fly   466 SVCNTNAYIMFFELDLSQAASPAANRPNGVR-LTNGHSTTPVPAATVSSPSPTRFIGPQLPAGGA 529
            .|.:..|||:||        |.:..||...: |...:.||........:.:|.:||||      .
plant   321 EVLSEKAYILFF--------SRSNQRPASAKTLVTSNGTTSHEVNGCETSNPQKFIGP------L 371

  Fly   530 NGYTNGNAQKTAIQFKQQNQQSPQNGLQLGTGKFQDTAKPPLVGAHAKGEATSAPTANGNKSSSP 594
            ||:          ..|.|.:||.|.|                                       
plant   372 NGF----------NMKPQAEQSFQKG--------------------------------------- 387

  Fly   595 SSNSSSNHKSINQQQYLPISSDDEDIEDEMKPRPTTAQLPSMPNMTENHTE-----PKAKSPVKI 654
            :..||..||.|                   :|:|...|.|...|:..:..|     |.||..:.:
plant   388 NLASSKPHKFI-------------------RPKPRAEQAPLEDNLLSSKVEKAPLRPHAKVSISV 433

  Fly   655 QVKTPVKTPLKSLVPYESASEEEEAPLPN--------PRKRPSGEDSSESDQESGQTNGHSKTNG 711
            .:.....:|:...:.:.  .:|..||..|        |.|..||     ::::.|..||   .||
plant   434 NLGAKRVSPVNGRLSFH--QDENIAPKANKENSVSVLPTKVNSG-----TERKFGTENG---GNG 488

  Fly   712 SHTNGSASSSVHVNNSKQKTDAIDEIFKSLKKSADSDEDDDEEEP--SIQLTNGW-HPQKQ---- 769
            ...||||..|     |..|. |:....:|...|...|...|...|  |....||. ||:.:    
plant   489 VKENGSAPGS-----SNHKV-ALHPHERSNGSSNGGDHHKDNLHPCGSNGSQNGTAHPETERNGV 547

  Fly   770 SQSQSKAPPSPKTPPSPAVIKSKTGIWKVTRNDEVDAIEDDV 811
            |.:|||...| .|...|.::..|.   :.:|| |::||::.:
plant   548 STTQSKGLCS-STKEDPCILLRKD---ESSRN-ELEAIKESL 584

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scnyNP_729092.1 Peptidase_C19E 171..477 CDD:239126 113/317 (36%)
UCH 172..477 CDD:278850 113/316 (36%)
Asp-B-Hydro_N <617..>731 CDD:191249 29/126 (23%)
UBP25NP_566486.1 Peptidase_C19E 23..333 CDD:239126 115/326 (35%)
UCH 23..332 CDD:278850 113/317 (36%)
EnY2 576..652 CDD:287172 3/9 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 179 1.000 Domainoid score I1057
eggNOG 1 0.900 - - E1_KOG1865
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 190 1.000 Inparanoid score I1390
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000177
OrthoInspector 1 1.000 - - otm2471
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24006
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1006
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.960

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