DRSC/TRiP Functional Genomics Resources

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Protein Alignment scny and UBP19

DIOPT Version :10

Sequence 1:NP_729092.1 Gene:scny / 38648 FlyBaseID:FBgn0260936 Length:1038 Species:Drosophila melanogaster
Sequence 2:NP_565576.1 Gene:UBP19 / 817000 AraportID:AT2G24640 Length:672 Species:Arabidopsis thaliana


Alignment Length:615 Identity:154/615 - (25%)
Similarity:246/615 - (40%) Gaps:118/615 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 KPKRVLYPRENIRIGWKQSERKWQVGTGMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLADC 210
            ||..||:|.|:. :.:...:|......|:.|.||:|:.|..||.|.....|..:|: |:.|..:|
plant   149 KPTDVLFPYESF-VRYYNWDRPIMAPCGLTNCGNSCFANVVLQCLSWTRPLVAYLL-ERGHKREC 211

  Fly   211 NVAEPGSGCIICAMTKTLLATQSNQSAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMER 275
               .....|.:|.....|.....::....|..|.|:|..|..::..||||||||.:||.::.|:.
plant   212 ---RRNDWCFLCEFENHLDRANYSRFPFSPMNIISRLPNIGGNLGYGRQEDAHELMRFAIDMMQS 273

  Fly   276 AYLMRFRNYKELDQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIR-KADSLED 339
            ..|..|...|.:....:|||.:..||||.|:|:|:|.:|::||..:::..||.::|. .|.|||:
plant   274 VCLDEFGGEKVVPPRAQETTLIQYIFGGLLQSQVQCTACSNVSDQYENMMDLTVEIHGDAVSLEE 338

  Fly   340 AFEGHFSRERLE-DMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIG---NKLTKQISFK 400
            ..:...::|.|: |..|||:.|...|.|.|:.|:..||..|.|.||||.  |   .||.|:|||.
plant   339 CLDQFTAKEWLQGDNLYKCDRCDDYVKACKRLSIRCAPNILTIALKRFQ--GGRFGKLNKRISFP 401

  Fly   401 SRIDLSKYAARSQAAQAQPLTYRLVSMVTHLGA--SQHCGHYTAIGSTDTGSFYNFDDSYVRPIA 463
            ...||..|  .|...:...: |:|.:::.||..  :...|||........|::|..|||.|..:.
plant   402 ETFDLGPY--MSGGGEGSDV-YKLYAVIVHLDMLNASFFGHYICYVKDFRGNWYRIDDSEVEKVE 463

  Fly   464 MHSVCNTNAYIMFFELDLSQAASPAANRPNGVRLTNGHSTTPVPAATVSSPSPTRFIGPQLPAGG 528
            :..|.:..||::.:        |....||:.:|.....                           
plant   464 LEDVLSQRAYMLLY--------SRVQPRPSNLRSEESQ--------------------------- 493

  Fly   529 ANGYTNGNAQKTAIQFKQQNQQSPQNGLQLGTGKFQDTAKPPLVGAHAKGEATSAPTANGNKSSS 593
                   :.:||.....:.||........:||   .||:    |.:...|..:.:......|.||
plant   494 -------DEKKTDTLNTESNQDGSVESSGVGT---NDTS----VSSLCNGIISHSEDPEYEKESS 544

  Fly   594 PSSN-----------------SSSNHKSINQQQYLPISSDDEDIEDEMKPRPTTAQLPSMPNMTE 641
            .|::                 .|.:::||:.:.  ...:|.::.|...|..||...|        
plant   545 LSASVPVSEEGKEVDVKVDTVDSESNRSIDMEH--DSGTDHQEEEANGKEDPTVENL-------- 599

  Fly   642 NHTEPKAKSPVKIQVKTPVKTPLKSLVPYES-ASEEEEAPLPNPRKRPSGEDSSESDQESGQTNG 705
                  |.....:.:.||..:.....:|.|: .|:.|..||               ::|...|..
plant   600 ------AVDSSCLDITTPSPSAATEFIPQENERSDTESKPL---------------EKEHSDTES 643

  Fly   706 HSKTNGSHTNGSASSSVHVNNSKQKTDAID 735
            :......|.:   |.|..:......|:.||
plant   644 NKPLEKEHLD---SESKPLEKEHSDTEMID 670

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scnyNP_729092.1 Peptidase_C19E 171..477 CDD:239126 103/312 (33%)
UBP19NP_565576.1 zf-MYND 64..101 CDD:460312
Peptidase_C19E 173..478 CDD:239126 103/321 (32%)
MDN1 <478..>671 CDD:444083 44/268 (16%)
Blue background indicates that the domain is not in the aligned region.

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