DRSC/TRiP Functional Genomics Resources

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Protein Alignment scny and UBP4

DIOPT Version :10

Sequence 1:NP_729092.1 Gene:scny / 38648 FlyBaseID:FBgn0260936 Length:1038 Species:Drosophila melanogaster
Sequence 2:NP_565532.1 Gene:UBP4 / 816763 AraportID:AT2G22310 Length:365 Species:Arabidopsis thaliana


Alignment Length:361 Identity:95/361 - (26%)
Similarity:148/361 - (40%) Gaps:79/361 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 GMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLADCNVAEPGSGCIIC-AMTKTLLATQSNQS 236
            |..|.|||||.||.||||.........|:...|:    |.|:.....:.| |...:.:::|..::
plant    24 GFENFGNTCYCNSVLQALYFCAPFREQLLEHYAN----NKADAEENLLTCLADLFSQISSQKKKT 84

  Fly   237 AV-RPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFRNYKELDQLVKET------ 294
            .| .|.....:||:..:.......:||||||.:|:..:             ::.|.|||      
plant    85 GVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNEL-------------VEILEKETQATKAD 136

  Fly   295 ---------------TPLG-------------QIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDI 331
                           .||.             :||.|.|.:|.|||.|..|:...:.|.||.|||
plant   137 NETSSSPEKIANVLKAPLANGVHKEPIVTWVHKIFQGILTNETRCLRCETVTARDETFLDLSLDI 201

  Fly   332 RKADSLEDAFEGHFSRERL--EDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRF---SMIG- 390
            .:..|:....:...|.|.|  ||. :.|:.|.....|.|:..:::.|..|.|.||||   ..:| 
plant   202 EQNSSITSCLKNFSSTETLHAEDK-FFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYMEQLGR 265

  Fly   391 -NKLTKQISFKSRIDLSKYAARSQAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNF 454
             .||:.::.|...:.||     :...:...:.|.|.::|.|:|:..:.|||.::..:.....: |
plant   266 YKKLSYRVVFPLELKLS-----NTVDEYVDIEYSLFAVVVHVGSGPNHGHYVSLVKSHNHWLF-F 324

  Fly   455 DDSYVRPIAMHSV-----------CNT-NAYIMFFE 478
            ||..|..|...:|           .|| :.||:.:|
plant   325 DDESVEIIEESAVQTFFGSSQEYSSNTDHGYILLYE 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scnyNP_729092.1 Peptidase_C19E 171..477 CDD:239126 94/358 (26%)
UBP4NP_565532.1 Peptidase_C19G 24..360 CDD:239128 94/359 (26%)

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