DRSC/TRiP Functional Genomics Resources

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Protein Alignment scny and USP5

DIOPT Version :10

Sequence 1:NP_729092.1 Gene:scny / 38648 FlyBaseID:FBgn0260936 Length:1038 Species:Drosophila melanogaster
Sequence 2:NP_001092006.1 Gene:USP5 / 8078 HGNCID:12628 Length:858 Species:Homo sapiens


Alignment Length:305 Identity:59/305 - (19%)
Similarity:102/305 - (33%) Gaps:92/305 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   208 RVLDEELDSLDDDDEEIQFLRRMKMAKVVAVEEDVDDDEDRTRKHKKLSKVMKQNVEFPRGVGTS 272
            |:||:..|||.:..|.:..:..|...             |.|.|.|.|.|:.......|      
Human   747 RLLDQNKDSLINFKEFVTGMSGMYHG-------------DLTEKLKALYKLHLPPALIP------ 792

  Fly   273 EKSAKKDKMGKAFDDADYVKDDDEEEEEAV-SDVEL-----------ENKSARTRRGAEEGQSEV 325
                  ::...|.:.|.|..:|...|...: ||::|           |.:..|.....:|.:.|.
Human   793 ------EEAESALEAAHYFPEDSSSEASPLASDLDLFLPWEAQAGLQEQQEGRGSEDIQERREEK 851

  Fly   326 KTE-------MTVTTRRRSGHSGNLIEFPRGLPPAPPRKRKENGLE-------------VDQQLK 370
            :|.       :.:..:.:......:.:.        |:..:|..:|             ::|.|.
Human   852 ETSPPDYRHYLRIWAKEKEAQKETIKDL--------PKMNQEQFIELCKTLYNMFSEDPLEQDLY 908

  Fly   371 KAEA-AQRRKLQVEKAARESEAEAIRKIL------GQDSSRKKKEDKIKKRQEDKAKE----KAA 424
            .|.| .....|::.:..::..|...:|..      ..:|:.::.|..|.|..:|.|:|    .|.
Human   909 HAIATVASLLLRIGEVGKKFSALTTKKPRDGAHSGDHNSATEEDEPPISKLHQDPARECQPPAAG 973

  Fly   425 DSIARRS----------DTVKWVMGPSGTIVTFPEELGLPSIFNS 459
            |..|:.|          |:...|.|.||      |..|.||:..|
Human   974 DPQAKASGDMHLGKALQDSHVIVEGGSG------EGQGSPSLLLS 1012

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scnyNP_729092.1 Peptidase_C19E 171..477 CDD:239126 59/305 (19%)
USP5NP_001092006.1 zf-UBP_var 16..79 CDD:407678
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 74..96
zf-UBP 199..272 CDD:460464
Peptidase_C19B 327..854 CDD:239123 27/131 (21%)
UBA1_UBP5 655..702 CDD:270566
UBA2_UBP5 723..765 CDD:270569 7/17 (41%)
Blue background indicates that the domain is not in the aligned region.

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