DRSC/TRiP Functional Genomics Resources

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Protein Alignment scny and Usp17le

DIOPT Version :10

Sequence 1:NP_729092.1 Gene:scny / 38648 FlyBaseID:FBgn0260936 Length:1038 Species:Drosophila melanogaster
Sequence 2:NP_001243902.1 Gene:Usp17le / 625530 MGIID:107697 Length:540 Species:Mus musculus


Alignment Length:344 Identity:122/344 - (35%)
Similarity:185/344 - (53%) Gaps:31/344 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   159 IGWKQSERKWQVGTGMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLADCNVAEPGSGCIICA 223
            :.|:..:..   |.|:.|.||:||||:.||.|.|.|.||::::| |.|...|...|   ||.:||
Mouse    75 LSWESPQGP---GCGLQNTGNSCYLNAALQCLTHTPPLADYMLS-QEHSQTCCSPE---GCKMCA 132

  Fly   224 M----TKTLLATQSNQSAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFRNY 284
            |    |::||.:.|. ..::|..|.:  ....||    :||||||||.|.:|.|..:.|   :.:
Mouse   133 MEAHVTQSLLHSHSG-DVMKPSQILT--SAFHKH----QQEDAHEFLMFTLETMHESCL---QVH 187

  Fly   285 KELDQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADSLEDA-FEGHFSRE 348
            ::.|...::|:|:..||||:.||:::||.|...|.||..|.|:.|||..|.|:..| ::...|.|
Mouse   188 RQSDPTPQDTSPIHDIFGGWWRSQIKCLHCQGTSHTFDPFLDVPLDISSAQSVNQALWDTGKSEE 252

  Fly   349 RLEDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFS-MIGNKLTKQISFKSRIDLSKYAARS 412
            .|.:..|.|..|::|:.|:|...:..||..|.:.||||| ..||||.:::|:...:||..|.:..
Mouse   253 LLGENAYYCGRCRQKMPASKTLHVHIAPKVLLLVLKRFSAFTGNKLDRKVSYPEFLDLKPYLSEP 317

  Fly   413 QAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYVRPIAMHSVCNTNAYIMFF 477
            ...   ||.|.|.:::.|.||:.:.|||........|.:|..||:.|....:.||.|.|||::|:
Mouse   318 TGG---PLPYALYAVLVHDGATSNSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFY 379

  Fly   478 --ELDLSQAASPAANRPNG 494
              :.||.|.   :.:.|.|
Mouse   380 VQQTDLKQV---SIDMPEG 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scnyNP_729092.1 Peptidase_C19E 171..477 CDD:239126 115/311 (37%)
Usp17leNP_001243902.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
Peptidase_C19E 84..380 CDD:239126 116/312 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 431..461
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 499..540
Blue background indicates that the domain is not in the aligned region.

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