DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment scny and USP29

DIOPT Version :10

Sequence 1:NP_729092.1 Gene:scny / 38648 FlyBaseID:FBgn0260936 Length:1038 Species:Drosophila melanogaster
Sequence 2:NP_065954.1 Gene:USP29 / 57663 HGNCID:18563 Length:922 Species:Homo sapiens


Alignment Length:858 Identity:172/858 - (20%)
Similarity:288/858 - (33%) Gaps:265/858 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPVSMAVCETANVVNAALRESLGGNSSAGSSTDQAKSGEDTNGSLQNHIVANAKRILMAKIEYEE 65
            ||:.|:...|.  |...:.|:.||......|:| .::.||               ||.   |...
Human   146 MPLFMSKSPTH--VKKGILENQGGKGQNTLSSD-VQTNED---------------ILK---EDNP 189

  Fly    66 VPN--YHESVLENLKSKYIVIKPGNPGAINGFSGKNNTGKL-----VGANGHDNNGARKQAEHPN 123
            |||  |....|     |||.....||.::.... |:...||     ...||:.|......|....
Human   190 VPNKKYKTDSL-----KYIQSNRKNPSSLEDLE-KDRDLKLGPSFNTNCNGNPNLDETVLATQTL 248

  Fly   124 NQSHHIN-----HHNHQHPTSNPNELPKPKRVLYPRENIRIGWKQSERKWQVGTGMINVGNTCYL 183
            |..:.:.     .|:...|..|..::|                 ......|:..|..|:|||||:
Human   249 NAKNGLTSPLEPEHSQGDPRCNKAQVP-----------------LDSHSQQLQQGFPNLGNTCYM 296

  Fly   184 NSTLQALLHIPALANWLVSEQAHLADCNVAEPGS----GCIICAMTKTLLATQSNQSAVRPFLIY 244
            |:.||:|..||:.|:.|:::         ..|..    ..:|..:|:.|.......:.::..|:.
Human   297 NAVLQSLFAIPSFADDLLTQ---------GVPWEYIPFEALIMTLTQLLALKDFCSTKIKRELLG 352

  Fly   245 SKLKQICKHMVV---GRQEDAHEFLRFLVEAMERAYLMRFRNYKELDQL------VKE------- 293
            :..|.|.....:   ..|.||||||...::.::          :::::|      .||       
Human   353 NVKKVISAVAEIFSGNMQNDAHEFLGQCLDQLK----------EDMEKLNATLNTGKECGDENSS 407

  Fly   294 -------------TTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKAD-----SLEDA 340
                         ..|:...|...|:..:.|.:|.|..:..:....|.:::.:..     |::::
Human   408 PQMHVGSAATKVFVCPVVANFEFELQLSLICKACGHAVLKVEPNNYLSINLHQETKPLPLSIQNS 472

  Fly   341 FEGHFSRERLEDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGN-----KLTKQISFK 400
            .:..|..|.||   |.|:.||:| |...:.:..|....|.|.|||:| ..|     |..:|:...
Human   473 LDLFFKEEELE---YNCQMCKQK-SCVARHTFSRLSRVLIIHLKRYS-FNNAWLLVKNNEQVYIP 532

  Fly   401 SRIDLSKYAARSQAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYVRPIAMH 465
            ..:.||.|...|   ...||.         |.:|...|.                          
Human   533 KSLSLSSYCNES---TKPPLP---------LSSSAPVGK-------------------------- 559

  Fly   466 SVCNTNAYIMFFELDLSQAASPAANRPNGVRLTNGHSTTPVPAATVSSPSPTRFIGPQLPAGGAN 530
              |..        |::||......|.|    ||        |:..::|.|....:.|..|     
Human   560 --CEV--------LEVSQEMISEINSP----LT--------PSMKLTSESSDSLVLPVEP----- 597

  Fly   531 GYTNGNAQKTAIQ------FKQQNQQSPQNG--LQLGTGKFQDTA----KPPLVGAHAKGEATSA 583
               :.||.....|      .::|:|:..:||  |:.....|:|.|    :.|:..:.......|.
Human   598 ---DKNADLQRFQRDCGDASQEQHQRDLENGSALESELVHFRDRAIGEKELPVADSLMDQGDISL 659

  Fly   584 PTA---NGNKSSSPSSNSSSNH-KSINQ----QQYLPISSDDEDIEDEMKPRPTTAQLPSMPNMT 640
            |..   .|...|||.:.....| :.:.|    |:|...::..|...|.:     |.......:..
Human   660 PVMYEDGGKLISSPDTRLVEVHLQEVPQHPELQKYEKTNTFVEFNFDSV-----TESTNGFYDCK 719

  Fly   641 ENHTEPKAKSPVKIQVKTPVKTPLKSLVPYESASEE--EEAPLPNPRKRPSGEDSSESDQES--- 700
            ||.. |:....:..|::..::         ||..:|  ::||.|..||..:.|.:.|:..:|   
Human   720 ENRI-PEGSQGMAEQLQQCIE---------ESIIDEFLQQAPPPGVRKLDAQEHTEETLNQSTEL 774

  Fly   701 -------------GQTNGHSKT--NGSHTNGSASS-----------------SV--HVNNSKQKT 731
                         |..|..:|.  :..:|.|.|..                 ||  |:.:|....
Human   775 RLQKADLNHLGALGSDNPGNKNILDAENTRGEAKELTRNVKMGDPLQAYRLISVVSHIGSSPNSG 839

  Fly   732 DAIDEIFKSLKKS 744
            ..|.:::...|::
Human   840 HYISDVYDFQKQA 852

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scnyNP_729092.1 Peptidase_C19E 171..477 CDD:239126 70/348 (20%)
USP29NP_065954.1 PH_USP37_like 4..106 CDD:270122
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 160..196 13/54 (24%)
UCH 286..552 CDD:425685 66/301 (22%)
Peptidase_C19 <823..883 CDD:239072 6/30 (20%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.