DRSC/TRiP Functional Genomics Resources

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Protein Alignment scny and usp10

DIOPT Version :10

Sequence 1:NP_729092.1 Gene:scny / 38648 FlyBaseID:FBgn0260936 Length:1038 Species:Drosophila melanogaster
Sequence 2:NP_001006761.1 Gene:usp10 / 448441 XenbaseID:XB-GENE-966184 Length:805 Species:Xenopus tropicalis


Alignment Length:609 Identity:146/609 - (23%)
Similarity:218/609 - (35%) Gaps:204/609 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PVSMAV---------CETANVVNA-ALRESLGGNSSAG--------SSTDQAKSGEDTNGSLQNH 48
            ||..||         .|...|.|. .|..|..|.:|.|        |.:::||..|.:......|
 Frog   271 PVRTAVVQPFAGTDTTENLGVTNGQTLESSEEGTASNGVVLLPEVSSLSEEAKPEETSTAQAVVH 335

  Fly    49 IVA----------------NAKRILMAKIEYEEVPNYHESVLENLKSKYIVIKPG------NPGA 91
            :..                |:|.....::.|.|..|........:..|.:.||.|      :|.|
 Frog   336 LPGSASANPPAKSWASLFHNSKPSSTTQVAYVETKNATPVTSPQVTEKQVEIKEGPVPVSEDPVA 400

  Fly    92 INGFSGKNNTGKLVGANGHDNNGARKQAEHPNNQSHHINHHNHQHPTSNPNELPKPKRVLYPREN 156
            |. .:......|||                            |: |.|           |.||  
 Frog   401 IK-IAELLEEVKLV----------------------------HK-PVS-----------LQPR-- 422

  Fly   157 IRIGWKQSERKWQVGTGMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLADCNVAEPGSGCII 221
                            |:||.||.||:|:|||||:..|.:.:.:.|...:   .....|   |..
 Frog   423 ----------------GLINKGNWCYINATLQALVACPPMYHLMKSIPVY---TKAQRP---CTS 465

  Fly   222 CAMTKTLL--------------ATQ-SNQSAVR---------PFLIYSKLKQICKHMV--VGRQE 260
            ..|..:.:              |.| |.:..:|         |..|| :|..:.|..:  .||||
 Frog   466 TPMIDSFVRLMNEFTNMPILPKAKQASGEKVIRDIRPGAPFEPAYIY-RLLTVFKSSLSEKGRQE 529

  Fly   261 DAHEFLRFLVEAMERAYL------------MRFRN----YKELDQLVKE---------------- 293
            ||.|:|.|::..:....|            :...|    ..|.:::.|:                
 Frog   530 DAEEYLGFILNGLHEEMLSLKKLLLPQNDKIHINNGPDPVSEKEEINKDEQEGSDEEWEQVGPRH 594

  Fly   294 -----------TTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIR--KADSLEDAFEGHF 345
                       .||:..||||::||.|...|... |.|.|.|..|.|||:  |..:::||.|...
 Frog   595 KSSVTRQADFVQTPITDIFGGHMRSVVYQQSSKE-SATLQPFFTLQLDIQSEKIRTVQDALESLV 658

  Fly   346 SRERLEDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKR--FSMIG--NKLTKQISFKSRIDLS 406
            :||.::  ||..: .|::|...::.:||..|..|.:.|||  |...|  .||.|.|.:...:::|
 Frog   659 ARESVQ--GYTTK-TKQEVEICRRVTLEELPPVLVLHLKRFVFEKTGGCQKLIKNIEYPVDLEIS 720

  Fly   407 K----YAARSQAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDT-----GSFYNFDDSYVRPI 462
            |    ...:|:..:.| .||||.::|.|.|.|...||||    ||.     ..:...||..|:.|
 Frog   721 KDLLSPGVKSKIFKGQ-RTYRLFAVVYHHGNSATGGHYT----TDVFQIGLNGWLRIDDQTVKVI 780

  Fly   463 AMHSV----CNTNAYIMFF-ELDL 481
            ..:.|    ....||:::: .:||
 Frog   781 NQYQVVKQTVERTAYLLYYRRVDL 804

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scnyNP_729092.1 Peptidase_C19E 171..477 CDD:239126 106/393 (27%)
usp10NP_001006761.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 139..170
UBP12 <423..>642 CDD:227847 56/226 (25%)
Peptidase_C19 527..800 CDD:239072 78/281 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 561..593 3/31 (10%)
Blue background indicates that the domain is not in the aligned region.

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