DRSC/TRiP Functional Genomics Resources

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Protein Alignment scny and puf

DIOPT Version :10

Sequence 1:NP_729092.1 Gene:scny / 38648 FlyBaseID:FBgn0260936 Length:1038 Species:Drosophila melanogaster
Sequence 2:NP_001262923.1 Gene:puf / 42935 FlyBaseID:FBgn0039214 Length:3930 Species:Drosophila melanogaster


Alignment Length:709 Identity:143/709 - (20%)
Similarity:231/709 - (32%) Gaps:277/709 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 PKRVLYPRENIRIGWKQSERKWQVG-TGMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLADC 210
            ||:. ||.:.    |.:.|.:.:.| .|:.|:|.|||:.|.:|.|..:|         ||..|..
  Fly  1994 PKQP-YPWDY----WPRDEGRAECGYVGLTNLGATCYMASCVQHLYMMP---------QARAAVL 2044

  Fly   211 NVAEPGSGCIICAMTK---TLLATQ--------SNQSAVRPFLIYSKLKQICK-----H--MVVG 257
            .|  |.:     |..|   |||..|        |.:.:..|       :..|:     |  :..|
  Fly  2045 RV--PPN-----AARKHGPTLLELQRMFAYLLESERKSYNP-------RSFCRVYQMDHQPLNTG 2095

  Fly   258 RQEDAHEFLRFLVEAMERAYLMRFRNYKELDQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQ 322
            .|:|..||...||..:|..       ..:|..|||      ::|.|.|.:.|..|.|.|||.|.:
  Fly  2096 EQKDMAEFFIDLVSKLEDM-------TPDLKHLVK------RLFCGSLSNNVVSLDCGHVSRTAE 2147

  Fly   323 HFQDLLLDIRKADSLEDAFEGHFSRERLE-DMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRF 386
            .|..:...:....:|:::.:....::.|| |..|.|..|.|||.|.|:...::.|..||....|:
  Fly  2148 DFYTVRCQVADMRNLQESLDEVTVKDTLEGDNMYTCSQCGKKVRAEKRACFKKLPQILCFNTMRY 2212

  Fly   387 -----SMIGNKLTKQISFKSRIDLSKYAAR-----------------------------SQAAQA 417
                 :|:..|:....||..|:::..|..:                             ::.|:|
  Fly  2213 TFNMVTMLKEKVNTHFSFPLRLNMCHYVEKTLMPQQYKEERERRQKEKEGADGSGDGNDNEKAEA 2277

  Fly   418 -------QPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYN-------FDDSYVRPIAMHSVC 468
                   :...|.||.:..|.|.:.. |||.:.....|.:.|:       |:|:.|:|.....:.
  Fly  2278 TLDDDIEECYEYELVGVTVHTGTADG-GHYYSFIKERTKTSYHTHERWFLFNDAEVKPFDPSQIA 2341

  Fly   469 --------------------------NTN-AYIMFFELDLSQAASPAANRPNGVRLTNGHS---T 503
                                      .|| ||::|:|..|.:            .|...||   .
  Fly  2342 AECFGGEMTSKTYDSVTEKYLDFSFEKTNSAYMLFYERRLPE------------HLQRRHSELLV 2394

  Fly   504 TPVPAATVSSPSPTRFIGPQLPAGGANGYTNGNAQKTAIQFKQQNQQSPQNGLQLGTGKFQDTAK 568
            ||.|:.||..                                                       
  Fly  2395 TPTPSPTVEE------------------------------------------------------- 2404

  Fly   569 PPLVGAHAKGEATSAPTANGNKSSSPSSNSSSNHKSINQQQYLPISSD-DEDIEDEMKPRPTTAQ 632
                    |.|| ..||.....||.                   |.:| |.::|.|.|.:...||
  Fly  2405 --------KSEA-EEPTKMETSSSE-------------------IKADVDVEVEVEEKDKEKPAQ 2441

  Fly   633 LPSMPNMTENHTEPKAKSPVKIQVKTPVKTPLKSLVPYESASEEEEAPLPNPRKRPSGEDSSESD 697
                       |:.::|           :||.|..:..:.:.::|.......::...||:.||:|
  Fly  2442 -----------TDTESK-----------ETPAKEEIADDKSKQDEPEEKKIEKQSREGEEKSETD 2484

  Fly   698 ---------------QESGQTNGHSKTNGSHTNGSASSSVHVNNSKQKTDAIDEIFKSL 741
                           |.:...:.|.:.|.|::..|.......:.:.||.    ::|:.|
  Fly  2485 EKPTEMTTVSTEEEKQPTANCDNHQQNNNSNSKASNDQQPSTSKAAQKL----QLFRPL 2539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scnyNP_729092.1 Peptidase_C19E 171..477 CDD:239126 91/400 (23%)
pufNP_001262923.1 peptidase_C19C 2013..2382 CDD:239124 93/405 (23%)
DUF3517 2648..>2884 CDD:463438
MDN1 <3661..>3887 CDD:444083
Blue background indicates that the domain is not in the aligned region.

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