DRSC/TRiP Functional Genomics Resources

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Protein Alignment scny and USP17L1

DIOPT Version :10

Sequence 1:NP_729092.1 Gene:scny / 38648 FlyBaseID:FBgn0260936 Length:1038 Species:Drosophila melanogaster
Sequence 2:NP_001243802.1 Gene:USP17L1 / 401447 HGNCID:37182 Length:530 Species:Homo sapiens


Alignment Length:527 Identity:145/527 - (27%)
Similarity:225/527 - (42%) Gaps:95/527 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 NELPKPKRVLYPRENIRIGWKQSERKWQVGTGMINVGNTCYLNSTLQALLHIPALANWLVSEQAH 206
            ::|....|.|.|||.:.:   .|.|...||.|:.|:|||||.|::||.|.:...|||:::|.: |
Human    53 DDLAPVARQLAPREKLPL---SSRRPAAVGAGLQNMGNTCYENASLQCLTYTLPLANYMLSRE-H 113

  Fly   207 LADCNVAEPGSGCIICAMTKTLL-ATQSNQSAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLV 270
            ...|   :....|::|.|...:. |..|....::|    |:......|.  |:|||.||||.|.|
Human   114 SQTC---QRPKCCMLCTMQAHITWALHSPGHVIQP----SQALAAGFHR--GKQEDVHEFLMFTV 169

  Fly   271 EAMERAYLMRFRNYKELDQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKAD 335
            :||::|.|   ..:|::|...|:||.:.|||||..||:::||.|:.:|.||..:.|:.|||:.|.
Human   170 DAMKKACL---PGHKQVDHHCKDTTLIHQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQ 231

  Fly   336 SLEDAFEGHFSRERLE-DMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFS-MIGNKLTKQIS 398
            |::.|.|.....|.|. :..|.|..|.::..|:...:|..:...|.:.||||| :.||||.|.:.
Human   232 SVKQALEQLVKPEELNGENAYHCGLCLQRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQ 296

  Fly   399 FKSRIDLSKYAARSQAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYVRPIA 463
            :...:|:..|.::....   ||.|.|.:::.|.|.|.|.|||.:........:|..||:.|...:
Human   297 YPECLDMQPYMSQQNTG---PLVYVLYAVLVHAGWSCHDGHYFSYVKAQEVQWYKMDDAEVTVCS 358

  Fly   464 MHSVCNTNAYIMFF---------ELDLSQAASPAA-------NRPNGVRLTNGHSTTPVP----- 507
            :.||.:..||::|:         ...:|:...|.|       .|.....|...|.....|     
Human   359 IISVLSQQAYVLFYIQKSEWERHSESVSRGREPRALGAEDTDRRAKQGELKRDHPCLQAPELDEH 423

  Fly   508 ----AATVSSPSPTRFIGPQLPAGGANGYTNGNAQKTAIQFKQQNQQSPQNGLQLGTGKFQDTAK 568
                |...|:....:|:                        ::||:..|    :...||.:.|..
Human   424 LVERATQESTLDHWKFL------------------------QEQNKTKP----EFNVGKVEGTLP 460

  Fly   569 PPLVGAHAKGEATSAPTANGNKSSSPSSNSSSNHKSINQQQYLPISSDDEDIEDEMKPRPTTAQL 633
            |..:..|                .|.......||....|...|.:||.....::.|    .|..|
Human   461 PNALVIH----------------QSKYKCGMKNHHPEQQSSLLNLSSTTRTDQESM----NTGTL 505

  Fly   634 PSMPNMT 640
            .|:...|
Human   506 ASLQGRT 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scnyNP_729092.1 Peptidase_C19E 171..477 CDD:239126 105/308 (34%)
USP17L1NP_001243802.1 Peptidase_C19E 79..373 CDD:239126 106/309 (34%)
HABP4_PAI-RBP1 <417..454 CDD:461421 7/64 (11%)

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