Protein Alignment scny and Usp30

DIOPT Version :9

• Sequence 1: NP_729092.1
• Gene: scny / 38648
• FlyBaseID: FBgn0260936
• Length: 1038
• Species: Drosophila melanogaster
• Sequence 2: NP_001284912.1
• Gene: Usp30 / 31519
• FlyBaseID: FBgn0029819
• Length: 558
• Species: Drosophila melanogaster
• Alignment Length: 532
• Identity: 96/532 - (18%)
• Similarity: 165/532 - (31%)
• Gaps: 224/532 - (42%)

  Fly   160 GWKQSERKWQVGTGMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLADCNVAEPGSGCIICAM 224
            |.:..:|:.|: .|:.|.|.||:||:.|||:...|....||   |.:    |.|.|....:|.:|
  Fly    28 GSRLRQRRGQI-AGLHNFGLTCFLNTLLQAMAACPQFIAWL---QLY----NNASPDRKSLITSM 84

  Fly   225 TKTLLATQSNQSAVR--PFLIYSKLKQI-CKHMVVGRQE-DAHEFLRFLVEAMER---------- 275
            ..||.......:.:|  |:...:.|:.: ....|:.::| ||||....|:..:|.
  Fly    85 LNTLEVVNGTHATLRGDPYSPGAVLRALNALGWVIPQEEHDAHELFHVLLTCLEEEAIRPQPLGC 149

  Fly   276 --------------------------------------------------AYLMRFRN--YKE-- 286
                                                              |.|..|.|  |.|
  Fly   150 LSDALPTDNDDNSSLAGTATPVGGFRSFSSMAAGLGASQRIGDQPNRPSSAMLTDFLNMEYDEST 214

  Fly   287 -LDQLVKET------------------------------TPLG---------------------- 298
             |.:||:..                              ||.|
  Fly   215 SLQRLVRSEAHTPDSPASVCERDGNDRLGSVLLDAVSPGTPFGFPLVSNPDSLATPMLGGERSSR 279

  Fly   299 --------------------------------------------QI---FGGYLRSEVRCLSCNH 316
                                                        |:   |.|.:.:::.|..|..
  Fly   280 PRLPQSQQQQDEGLNRRVSSSCRSLERLHRGPGRVSIWSNMMPSQVAHPFQGAMGAQIVCNGCGS 344

  Fly   317 VS-ITFQHFQDLLLDI----RKADSLEDAFEGHFSRERLEDMGYKCEGCKKKVSATKQFSLERAP 376
            .| :.:..|..:.|::    |...||......:.:.|.|.|:  ||:.|.:..:.||..:..:.|
  Fly   345 KSAVRYDKFDSITLNLPPQRRTGLSLGHLLSEYITSEDLSDV--KCDSCNETTTHTKSVTFAKLP 407

  Fly   377 ITLCIQLKRFSMIGN----KLTKQISFKSRIDLSKYA-----ARSQA-----------AQAQPLT 421
            ..|||.:.|...:..    |....:.|...:.::.|:     ..|||           :.:.|:.
  Fly   408 ACLCIHVARTVWLPTGQVCKRKDYVHFPESLSMAPYSFVQPHLNSQAGTPWGSTMSLYSSSLPMN 472

  Fly   422 -----------------YRLVSMVTHLGASQHCGHYTAI--GS-TDTGSFYNFDDSYVRPIAMHS 466
                             |||:::|.|.|.: :.||:...  || .:...:|...|:.||.:::..
  Fly   473 NGVGGGEGFGTMFPKNLYRLLAVVVHSGEA-NSGHFVTYRRGSLRNAHRWYYTSDTIVREVSIDE 536

  Fly   467 VCNTNAYIMFFE 478
            |.:..||::|::
  Fly   537 VLSVPAYLLFYD 548

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
scny	NP_729092.1	Peptidase_C19E	171..477	CDD:239126	92/518 (18%)
		UCH	172..477	CDD:278850	92/517 (18%)
		Asp-B-Hydro_N	<617..>731	CDD:191249
Usp30	NP_001284912.1	Peptidase_C19	39..>139	CDD:271592	31/106 (29%)
		UCH	<304..547	CDD:278850	48/245 (20%)
		Peptidase_C19F	<323..548	CDD:239127	49/227 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45456886
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR24006
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.940