DRSC/TRiP Functional Genomics Resources

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Protein Alignment scny and Usp16-45

DIOPT Version :9

Sequence 1:NP_729092.1 Gene:scny / 38648 FlyBaseID:FBgn0260936 Length:1038 Species:Drosophila melanogaster
Sequence 2:NP_001284890.1 Gene:Usp16-45 / 31458 FlyBaseID:FBgn0029763 Length:1126 Species:Drosophila melanogaster


Alignment Length:1073 Identity:210/1073 - (19%)
Similarity:341/1073 - (31%) Gaps:377/1073 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 ENLKSKYIVIKPGNPGAINGFSGKNNTGKLVGANGHDNNGARKQAE--------HPNN------- 124
            |.||:....:.|..|.....|...::.|.|..|.|....|:.:..:        .|::       
  Fly   198 EKLKAALEHLTPIVPMTGGSFDDSSSRGSLAAAGGGGGVGSSRNRQVAIPMPPPEPSSGLSTSDS 262

  Fly   125 ------QSHHINHHNHQHPTSNPNELPKPKRVLYPRENIRIGWKQSERKWQVGTGMINVGNTCYL 183
                  .:..|:.::   .|:|.|  ...||:| ..|..||   ::||..:| .|:.|:||||:.
  Fly   263 LTSVPGMAKRIDQYS---ATTNGN--TGNKRLL-TLETPRI---ENERLPRV-RGLTNLGNTCFF 317

  Fly   184 NSTLQALLHIPALANWLVSEQAHLADCNVAEPGS-----------------------------GC 219
            |:.:|.|...|.|.:.|.         .::|||.                             |.
  Fly   318 NAVMQCLAQTPFLLSVLK---------ELSEPGEEFILPGGTFTIKDKGDIELPMIKGTLSSWGG 373

  Fly   220 IICAMTKTLLATQSNQSAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFR-- 282
            :..|:...|...|:..|...|..::.:|...|.....|.|.||||.||.|:|::....|.|::  
  Fly   374 LTAALANALEELQAGGSVFTPRKLFDRLCVKCPQFTGGDQHDAHELLRQLLESVRNEDLKRYQRV 438

  Fly   283 -----NYKELD------QLVKETTPLG-----------QIFGGYLRSEVRCLSCNHVSITFQHFQ 325
                 .||:.|      ::.::....|           |:|.|:|.|.:.|..|::||...::|.
  Fly   439 ILQNLGYKDQDVNSVSEEMRQKCKIYGNQAGDRILRPEQVFRGFLVSTLTCQDCHNVSSRHEYFL 503

  Fly   326 DLLLDIRKADSLEDAFEGHFSRERLEDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIG 390
            |:.|                                              |:.:           
  Fly   504 DMSL----------------------------------------------PVAV----------- 511

  Fly   391 NKLTKQISFKSRIDLSKYAARSQAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFD 455
                                    .:.||...|..|....|.:|                     
  Fly   512 ------------------------EKPQPPQRRKPSPELSLTSS--------------------- 531

  Fly   456 DSYVRPIAMHSVCNTNAYIMFFELDLSQAASPAANRPN-GVRLTNGHSTTPVPAATVSSPS---- 515
                                      |.:.:|:..:|. ..:.|:|...     .|.||||    
  Fly   532 --------------------------SSSVTPSTGQPTINTKFTDGSVN-----FTASSPSFFLH 565

  Fly   516 --PTRFIGPQLPAGGANGYTNGNAQKTAIQFKQQ----NQQSPQNGLQLGTGKFQDTAKPPLVGA 574
              ....:||..............|::.|.:.::.    |.....||.:|.....||.|....:||
  Fly   566 AHEAASLGPSKSQVKKEKERQRKAKRAAKKRQKSSLNLNGNDSGNGNELAESVDQDDASLASLGA 630

  Fly   575 HAKGEATSA-PTANG-NKSSSPSSNSSSNHKSINQQQYLPISSDDEDIED---EMKPRPTTAQLP 634
             ..|:|... ...|| .:.|:.||.::|.|             .|.|:||   |....|:|..:|
  Fly   631 -GDGQANDGLEQTNGQTEDSTTSSVTTSEH-------------SDADVEDNLVEDTAAPSTNNVP 681

  Fly   635 S------MPNMTENHTEPKAKSPVKIQVKTPVKTPLKSLVPYESASEEEEAPLPNPRKRPSGEDS 693
            |      .|:.|...:...|:.|.:.:..||......||...|:.|....:|      .|:..:|
  Fly   682 SSTASLTAPSKTYMDSNGNAQPPGEKRDDTPEHMDKDSLEEDENDSGIATSP------APTATNS 740

  Fly   694 SESDQESGQTNGHSKTNGSHTNGSA---------SSSVHVNNSKQKTDAIDEIFKSLKKSA-DSD 748
            |.|...:|..|   ...||..:||:         :|.|....|::....|.::....::.| :..
  Fly   741 STSTSATGNNN---SVAGSGLSGSSGALEDPLAPASLVTAGLSEKGASVIRQVSVGAEQGASNGT 802

  Fly   749 EDDDEEEPSIQLTNGWHPQK---QSQSQSKAPPSPK-----------TPPSP------------A 787
            ||.|.|..:|:     .|:|   |:|:.::|....|           |..:|            :
  Fly   803 EDADGEAKAIE-----QPEKTPSQAQAMAQAQARTKRVRTQSYSDWSTTIAPRYQCEDGECSVQS 862

  Fly   788 VIKSKTGIWKVTRNDEVDAIEDDVDVVVVEGSPVKIPTPNKNHRNPFSSSKPSTDSPAT--PGAK 850
            .:.:.|.:..:|..::|..   |.....:.||..|..:.|.|.......|.|    ||.  ...|
  Fly   863 CLNNFTAVELMTGQNKVGC---DSCTQRINGSDPKAKSVNTNATKQLLVSSP----PAVLILHLK 920

  Fly   851 RQKLLNGSALKSHQQPRVGNGYQSNATSNGSTINEL-------LKQSYRGYG------------- 895
            |.:|......:...:|.........|...||.:..|       .|..|..||             
  Fly   921 RFQLGPRCIFRKLTRPVSYPNLLDIAAFCGSKVKNLPNIDRKQKKLLYALYGVVEHSGGMYGGHY 985

  Fly   896 ------SPVLS-----W----NGKPAELE---------KELLV--DAREQRQRDIDDDEENEMDR 934
                  .|.::     |    :|..|||:         :|||.  .||||..:.:||.::..   
  Fly   986 TAYVKVRPKVAPGDKRWKFLPHGSKAELDQDDDQLKKLEELLAKEKAREQHLKVLDDSDDFS--- 1047

  Fly   935 GRQRKVKSGSAKGNNASNSTPGYNPFQEYEGQK 967
                  .|.|....:..:.||. .|.:|.:.|:
  Fly  1048 ------NSSSNSSTSDESQTPA-TPLEEQQTQQ 1073

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scnyNP_729092.1 Peptidase_C19E 171..477 CDD:239126 58/358 (16%)
UCH 172..477 CDD:278850 58/357 (16%)
Asp-B-Hydro_N <617..>731 CDD:191249 33/131 (25%)
Usp16-45NP_001284890.1 zf-UBP 108..159 CDD:280334
Peptidase_C19 307..>512 CDD:271592 52/294 (18%)
Peptidase_C19K <849..1123 CDD:239132 48/242 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45456888
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24006
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.030

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