DRSC/TRiP Functional Genomics Resources

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Protein Alignment scny and ubp16

DIOPT Version :10

Sequence 1:NP_729092.1 Gene:scny / 38648 FlyBaseID:FBgn0260936 Length:1038 Species:Drosophila melanogaster
Sequence 2:NP_587805.1 Gene:ubp16 / 2538947 PomBaseID:SPCC1682.12C Length:457 Species:Schizosaccharomyces pombe


Alignment Length:480 Identity:145/480 - (30%)
Similarity:229/480 - (47%) Gaps:48/480 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 GSSTDQAKSGEDTNGSLQNHIVANAKRILMAKIEYEEVPNYHESVLENLKSKYIVIKPGNPGAIN 93
            |.|.|.|     ...||.: ::.|..|...|.:....||....:||.|.|...:..|        
pombe     8 GQSLDFA-----VKHSLDD-LLKNPVRFRPAVVSSPSVPEGTYTVLNNPKQSTVSRK-------- 58

  Fly    94 GFSGKNNTGKLVGANGHDNNGARKQAEHPNNQSHHINHHNHQHPTSNPNELPKPKRVLYPRENIR 158
            .||...:..:    |....:.:::..:....:....|....:.|...|     |.|:|:|.|.:.
pombe    59 SFSAPTSPTR----NKRSGSSSQEYKKSSGTRGDGANDFVDEDPAFIP-----PARILFPEEKLS 114

  Fly   159 IGWKQSERKWQVGTGMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLADCNVAEPGSGCIICA 223
            :.|   :.......|::|:||||::||.||.:...|.|..:|:|.| |...|.:    :.|::|.
pombe   115 MEW---DNIMPNAPGLVNLGNTCFMNSVLQLMTQTPPLVQYLLSGQ-HSLSCRM----NACVLCR 171

  Fly   224 MTKTLLATQSNQ-----SAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFRN 283
            |.:.:.....|:     ||.:|..|.|.||.|..|....||||||||:|:||:|.:::.|   :|
pombe   172 MEQHVARAYPNKGTKRASAFKPSGIQSMLKVISSHFRPYRQEDAHEFMRYLVDAWQKSCL---QN 233

  Fly   284 YKELDQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADSLEDAFEGHFSRE 348
            :|.||...:||:.:.:|||||||.::.|..|...|.|:|...||.:| .|..||.|:.:.....|
pombe   234 HKNLDHPSRETSVVHRIFGGYLRQQILCSVCKKPSNTYQALLDLSVD-AKGSSLADSLKHFVHAE 297

  Fly   349 RLEDMG-YKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIG---NKLTKQISFKSRIDLSKYA 409
            :|.... |:||.||:.|.|:||.::.|||..|.|..|||:..|   :|::||||:....:|..|.
pombe   298 KLTKQNKYRCENCKQLVDASKQMTIYRAPNILTIHFKRFTFNGFQSSKISKQISYPESFNLGPYM 362

  Fly   410 ARSQAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYVRPIAMHSVCNTNAYI 474
            :....:    ..|.|:.::.|.|.|...|||.:...:..|.:..|||.:|...::..|.|..|||
pombe   363 SDPNCS----CWYELIGVLVHAGGSTRSGHYYSFCKSSNGVWLKFDDDFVSNSSIDRVLNQQAYI 423

  Fly   475 MFFELDLSQAASPAANRPNGVRLTN 499
            :.::...:.::....|..|.|..|:
pombe   424 LQYKRKSTSSSKHKLNTENTVTKTS 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scnyNP_729092.1 Peptidase_C19E 171..477 CDD:239126 113/314 (36%)
ubp16NP_587805.1 Peptidase_C19E 124..426 CDD:239126 113/314 (36%)

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