DRSC/TRiP Functional Genomics Resources

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Protein Alignment scny and Usp10

DIOPT Version :10

Sequence 1:NP_729092.1 Gene:scny / 38648 FlyBaseID:FBgn0260936 Length:1038 Species:Drosophila melanogaster
Sequence 2:XP_006530908.1 Gene:Usp10 / 22224 MGIID:894652 Length:818 Species:Mus musculus


Alignment Length:659 Identity:149/659 - (22%)
Similarity:231/659 - (35%) Gaps:246/659 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PVSMAVCETAN---------VVNAALRESLGGNS-SAG----------------------SSTDQ 34
            ||....|::..         |.::....:|||:: :||                      ::..|
Mouse   226 PVMPRTCDSPQNPVDFISGPVPDSPFPRTLGGDARTAGLCEGCHEADFEQPCLPADSLLRTAGTQ 290

  Fly    35 AKSGEDTNGSLQNHIVANAKRILMAKIEYEEVPNYHESVLENLKSKYIVIKPGNPGAINGFSGKN 99
            ...|.||.   :|..|||.|                  :||:         ||...|.|      
Mouse   291 PYVGTDTT---ENFAVANGK------------------ILES---------PGEDTAAN------ 319

  Fly   100 NTGKLVGANGHDNNGARKQAEHPNNQSHHIN---------------------HHNHQHPTSNP-- 141
                  ||..|.:.||......|.:||....                     .|:.:...|:|  
Mouse   320 ------GAELHTDEGADLDPAKPESQSPPAESALSASGAIPISQPAKSWASLFHDSKPSASSPMA 378

  Fly   142 -------NELPKP---------KRVLYPRENIRIGWKQSERKWQV----------GTGMINVGNT 180
                   ..:|.|         |..|.|.....:..|.:|....|          ..|:||.||.
Mouse   379 YVETKCSPPVPSPLASEKQMEVKEGLVPVSEDPVAIKIAELLETVTLIHKPVSLQPRGLINKGNW 443

  Fly   181 CYLNSTLQALLHIPALANWLVSEQAHLAD-----CNVAEPGSGCIICAMTKTLLATQSN------ 234
            ||:|:|||||:..|.:        .||..     ..|..|   |....|..:.:...:.      
Mouse   444 CYINATLQALVACPPM--------YHLMKFIPLYSKVQRP---CTSTPMIDSFVRLMNEFTNMPV 497

  Fly   235 ------------------QSAVRPFLIYSKLKQICKHMV--VGRQEDAHEFLRFLVEAMERAYLM 279
                              .:|..|..|| :|..:.|..:  .||||||.|:|.|::..:....| 
Mouse   498 PPKPRQALGDKIVRDIRPGAAFEPTYIY-RLLTVIKSSLSEKGRQEDAEEYLGFILNGLHEEML- 560

  Fly   280 RFRNYKEL--------------------DQLVKET---------------------------TPL 297
               :.|:|                    |:.:::|                           ||:
Mouse   561 ---SLKKLLSPTHEKHSVSNGPRSDLIEDEELEDTGKGSEDEWEQVGPKNKTSITRQADFVQTPI 622

  Fly   298 GQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIR--KADSLEDAFEGHFSRERLEDMGYKCEGC 360
            ..||||::||.|...|... |.|.|.|..|.|||:  |..:::||.|...:||.::  ||..: .
Mouse   623 TGIFGGHIRSVVYQQSSKE-SATLQLFFTLQLDIQSDKIRTVQDALESLVARESVQ--GYTTK-T 683

  Fly   361 KKKVSATKQFSLERAPITLCIQLKRF--SMIG--NKLTKQISFKSRIDLSKY----AARSQAAQA 417
            |::|..:::.:||:.|..|.:.||||  ...|  .||.|.|.:...:::|:.    ..:::..:.
Mouse   684 KQEVEVSRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLVKNIDYPVDLEISRELLSPGIKNKNFKC 748

  Fly   418 QPLTYRLVSMVTHLGASQHCGHYTAIGSTDT-----GSFYNFDDSYVRPIAMHSV----CNTNAY 473
            | .||||.::|.|.|.|...||||    ||.     ..:...||..|:.|..:.|    .:..||
Mouse   749 Q-RTYRLFAVVYHHGNSATGGHYT----TDVFQIGLNGWLRIDDQTVKVINQYQVVKPPADRTAY 808

  Fly   474 IMFF-ELDL 481
            :::: .:||
Mouse   809 LLYYRRVDL 817

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scnyNP_729092.1 Peptidase_C19E 171..477 CDD:239126 104/402 (26%)
Usp10XP_006530908.1 Peptidase_C19 540..813 CDD:239072 77/285 (27%)

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