DRSC/TRiP Functional Genomics Resources

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Protein Alignment scny and Usp12

DIOPT Version :10

Sequence 1:NP_729092.1 Gene:scny / 38648 FlyBaseID:FBgn0260936 Length:1038 Species:Drosophila melanogaster
Sequence 2:NP_035799.1 Gene:Usp12 / 22217 MGIID:1270128 Length:370 Species:Mus musculus


Alignment Length:344 Identity:88/344 - (25%)
Similarity:154/344 - (44%) Gaps:54/344 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 GMINVGNTCYLNSTLQALLHIPALANWLVS------EQAHLADCNVAEPGSGCIICAMTKTLLAT 231
            |::|.|||||.||.||||.........:::      ::.:|..|          :..:..::...
Mouse    40 GLVNFGNTCYCNSVLQALYFCRPFREKVLAYKSQPRKKENLLTC----------LADLFHSIATQ 94

  Fly   232 QSNQSAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLV---------EAMERAYLMRFRNYKEL 287
            :.....:.|....::|::..:......|:||||||.:|:         |..:.....|.|| .::
Mouse    95 KKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRLRN-GDV 158

  Fly   288 DQLVKETTP----LGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADSLEDAFEGHFSRE 348
            |.....:||    :.:||.|.|.:|.|||:|..:|...:.|.||.:|:.:..|:.....|..:.|
Mouse   159 DNEDNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSITHCLRGFSNTE 223

  Fly   349 RL-EDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIG-----NKLTKQISFKSRIDLSK 407
            .| .:..|.||.|:.|..|.|:..:::.|:.|.:.||||..:.     .||:.::.|.  ::|..
Mouse   224 TLCSEYKYYCEECRSKQEAHKRMKVKKLPLILALHLKRFKYMDQLHRYTKLSYRVVFP--LELRL 286

  Fly   408 YAARSQAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFY-NFDDSYVRPIAMHSV---- 467
            :.....|.....: |.||::|.|.|:..:.|||.||  ..:..|: .|||..|..|...::    
Mouse   287 FNTSGDATNPDRM-YDLVAVVVHCGSGPNRGHYIAI--VKSHDFWLLFDDDIVEKIDAQAIEEFY 348

  Fly   468 --------CNTNAYIMFFE 478
                    .:.:.||:|::
Mouse   349 GLTSDISKNSESGYILFYQ 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scnyNP_729092.1 Peptidase_C19E 171..477 CDD:239126 87/341 (26%)
Usp12NP_035799.1 Required for plasma membrane localization of USP12/WDR20. /evidence=ECO:0000250|UniProtKB:O75317 1..4
Peptidase_C19G 40..367 CDD:239128 88/342 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 146..168 5/22 (23%)
Blue background indicates that the domain is not in the aligned region.

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