DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment scny and USP12

DIOPT Version :10

Sequence 1:NP_729092.1 Gene:scny / 38648 FlyBaseID:FBgn0260936 Length:1038 Species:Drosophila melanogaster
Sequence 2:NP_872294.2 Gene:USP12 / 219333 HGNCID:20485 Length:370 Species:Homo sapiens


Alignment Length:342 Identity:93/342 - (27%)
Similarity:158/342 - (46%) Gaps:50/342 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 GMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLADCNVAEPGSGCIICAMTKTLLATQSNQSA 237
            |::|.|||||.||.||||.........::   |:.:.....|....|:  |.....:|||..:..
Human    40 GLVNFGNTCYCNSVLQALYFCRPFREKVL---AYKSQPRKKESLLTCL--ADLFHSIATQKKKVG 99

  Fly   238 VRP---FLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFRNYKE----------LDQ 289
            |.|   |:  ::|::..:......|:||||||.:|:..:  |.:::....:|          :|.
Human   100 VIPPKKFI--TRLRKENELFDNYMQQDAHEFLNYLLNTI--ADILQEERKQEKQNGRLPNGNIDN 160

  Fly   290 LVKETTP----LGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADSLEDAFEGHFSRERL 350
            ....:||    :.:||.|.|.:|.|||:|..:|...:.|.||.:|:.:..|:.....|..:.|.|
Human   161 ENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSITHCLRGFSNTETL 225

  Fly   351 -EDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIG-----NKLTKQISFKSRIDLSKYA 409
             .:..|.||.|:.|..|.|:..:::.|:.|.:.||||..:.     .||:.::.|.  ::|..:.
Human   226 CSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYTKLSYRVVFP--LELRLFN 288

  Fly   410 ARSQAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFY-NFDDSYVRPIAMHSV------ 467
            ....|.....: |.||::|.|.|:..:.|||.||  ..:..|: .|||..|..|...::      
Human   289 TSGDATNPDRM-YDLVAVVVHCGSGPNRGHYIAI--VKSHDFWLLFDDDIVEKIDAQAIEEFYGL 350

  Fly   468 ------CNTNAYIMFFE 478
                  .:.:.||:|::
Human   351 TSDISKNSESGYILFYQ 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scnyNP_729092.1 Peptidase_C19E 171..477 CDD:239126 92/339 (27%)
USP12NP_872294.2 Required for plasma membrane localization of USP12/WDR20. /evidence=ECO:0000269|PubMed:30466959 1..4
Peptidase_C19G 40..367 CDD:239128 93/340 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 145..169 4/23 (17%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.