DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment scny and T24B8.7

DIOPT Version :9

Sequence 1:NP_729092.1 Gene:scny / 38648 FlyBaseID:FBgn0260936 Length:1038 Species:Drosophila melanogaster
Sequence 2:NP_495931.4 Gene:T24B8.7 / 174440 WormBaseID:WBGene00011980 Length:2938 Species:Caenorhabditis elegans


Alignment Length:510 Identity:96/510 - (18%)
Similarity:171/510 - (33%) Gaps:200/510 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 ELPKPKRVLYPRENIRIGWKQSERKWQVGT----------------------------------- 172
            |||..:..::..|:||  |:...|:..:.|                                   
 Worm  1747 ELPDIEDSMFEEESIR--WEYQAREAAIQTLNAFCERSYKNSHQLLNMWSKFMIAQKTYDPSYRP 1809

  Fly   173 ----------GMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLADCNVAEP------GSGCII 221
                      ||.|.|.|||:|:.:|.|:|:|.|:..|::.|      |: :|      .:..::
 Worm  1810 IIRGRQFDKVGMKNDGGTCYMNAMIQQLVHVPGLSRELIALQ------NI-DPQLRWGDNTAALL 1867

  Fly   222 CAMTKTLLATQSNQ-SAVRPFLIYSKLK-QICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFRNY 284
            |.:.:........| .|:.|..::.:.: :....:...:..||.:|...|::             
 Worm  1868 CELQRVFAQLNFAQCQAIVPEGLWKEFRFEPDMPLNTKQHHDAIDFYSILLD------------- 1919

  Fly   285 KELDQLVK--ETTPLGQ--IFGGYLRSEVRCLSCNH-VSITFQHFQDLLLDIRKADSLEDAFEGH 344
             :.|.::|  |..||.|  .||.|...:: |..|.| .....:.|..:.|.: ..|:||:|.|..
 Worm  1920 -KCDNVLKKLELPPLFQNRFFGKYSYEKI-CYGCWHRYKSPDEEFNCISLAL-SGDNLEEALENF 1981

  Fly   345 FSRERLE-DMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFS--MIGNKLTKQ---ISFKSRI 403
            .:...:| :..|.||.|.:|.:...:.|....|.|:.||||||:  ::.|.:.|.   ..|...|
 Worm  1982 LAAHVMEGENAYHCEKCDEKKTTLNRTSFLELPSTMTIQLKRFTYDLVNNMIRKDNQLFRFPFEI 2046

  Fly   404 DLSKYAARSQ------------------------------------------------------- 413
            |::.|...|:                                                       
 Worm  2047 DMTPYMTTSRHVPDEHVQDLFDEMLYGNGEADEAPSPPHKNGVAEKPNLGSGSASTPSLESAQKK 2111

  Fly   414 ------------------------AAQAQPLTYRLVSMVTHLGASQHCGHYTAI---------GS 445
                                    .:|.:||.|.||.::.|.|.:. .|||.:.         .|
 Worm  2112 MFRRHRSSTMRLSQSFANTSGFDTPSQQKPLIYELVGVLAHSGIAT-AGHYYSFIKERREEFRDS 2175

  Fly   446 TDTGSFYNFDDSYVRPIAMHS----------------------VCNTNAYIMFFE 478
            .....:::.:|..|.|::.::                      |.:.|||::|:|
 Worm  2176 PHYNKWHHINDMIVSPMSFNNIEDLWYGGTFTQEGVFIGLDERVRHWNAYVLFYE 2230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scnyNP_729092.1 Peptidase_C19E 171..477 CDD:239126 86/479 (18%)
UCH 172..477 CDD:278850 86/478 (18%)
Asp-B-Hydro_N <617..>731 CDD:191249
T24B8.7NP_495931.4 UBA 133..168 CDD:197551
peptidase_C19C 1819..2234 CDD:239124 87/436 (20%)
UCH 1819..2229 CDD:278850 85/433 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160166323
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.