DRSC/TRiP Functional Genomics Resources

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Protein Alignment scny and LOC100910107

DIOPT Version :9

Sequence 1:NP_729092.1 Gene:scny / 38648 FlyBaseID:FBgn0260936 Length:1038 Species:Drosophila melanogaster
Sequence 2:XP_038953753.1 Gene:LOC100910107 / 100910107 RGDID:6500127 Length:503 Species:Rattus norvegicus


Alignment Length:615 Identity:156/615 - (25%)
Similarity:249/615 - (40%) Gaps:148/615 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 QHPTSNPNELPK----PKRVLYPRENIRIGWKQS---ERKWQVGTGMINVGNTCYLNSTLQALLH 192
            :.|..:|...|:    ..|||   |.:....|.|   :|....|:|:.|:||:||||:.||.|.|
  Rat     9 EDPAMSPPATPELHQDEARVL---EELSAKGKPSLSLQRIQSPGSGLQNIGNSCYLNAVLQCLTH 70

  Fly   193 IPALANWLVSEQAHLADCNVAEPGSGCIICAM----TKTLLATQSNQSAVRPFLIYSKLKQICKH 253
            .|.||::::| |.|...|...|   ||.:|||    |::||.:.|. ..::|..|.:  ....||
  Rat    71 TPPLADYMLS-QEHSQRCCYPE---GCKMCAMEAHVTQSLLHSHSG-GVMKPSEILT--STFHKH 128

  Fly   254 MVVGRQEDAHEFLRFLVEAMERAYLMRFRNYKELDQLVKETTPLGQIFGGYLRSEVRCLSCNHVS 318
                |||||||||.|.:.||..:.|   |..|:.:...|:::.:..||||.:||:::|..|....
  Rat   129 ----RQEDAHEFLMFTLNAMHESCL---RGCKQSETSSKDSSLIYDIFGGQMRSQIKCHHCQGTL 186

  Fly   319 ITFQHFQDLLLDIRKADSLEDAFEGHFSRERLE-DMGYKCEGCKKKVSATKQFSLERAPITLCIQ 382
            .::..|.:|.|||..|.|::.|.|.....|.|: |..|.|..|::|:.|:|...::.|...|.:.
  Rat   187 DSYDPFLNLFLDICSAQSVKQALEDLVKLEELQGDNAYYCGRCREKMPASKTTKVQTASKVLLLV 251

  Fly   383 LKR-FSMIGNKLTKQISFKSRIDLSKYAARSQAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGST 446
            |.| :...|:||.:.:|:...:||..|.::..|.   ||.|.|.:::.|.|.:...|||......
  Rat   252 LNRSYDFGGDKLNRVVSYPEYLDLQPYLSQPTAG---PLPYALYAVLVHDGVTCSSGHYFCYVKA 313

  Fly   447 DTGSFYNFDDSYVRPIAMHSVCNTNAYIMFF--ELDLSQAASPAANRPNGVRLTNGHSTTPVPAA 509
            ..|.:|..|||.|....:.||.:..||::|:  :.||.:                          
  Rat   314 SHGKWYKMDDSKVTRCDVSSVLSEPAYLLFYVQQTDLEK-------------------------- 352

  Fly   510 TVSSPSPTRFIGPQLPAGGANGYTNGNAQKTAIQFKQQNQQSPQNGLQLGTGKFQDTAKPPLVGA 574
                      :...:..|..:|..:..:|:...:.|:..:.|..                     
  Rat   353 ----------VNVDVSVGRVHGVLHPESQQKKTRKKKHKRSSCT--------------------- 386

  Fly   575 HAKGEATSAPTANGNKSSSPSSNSSSNHKSINQQQYLPISSDDEDIEDEMKPRPTTAQLPSMPNM 639
                ||...|..|       ..|:::...|:.:.:.|                           .
  Rat   387 ----EAVHMPREN-------RENTATKETSLGEGKVL---------------------------Q 413

  Fly   640 TENHTEPKAKSPVKIQVKTPVKTPLKSLV---PYESASEEEEAPLPNPRKRPSGED--SSESDQE 699
            .:||  .||...:|   .|.|.......|   |..:|:....||..:.:...||:.  :::....
  Rat   414 EQNH--QKAGQNLK---TTKVNLSANGTVIHQPRYTANWGRNAPDKDDQPGHSGDRLLTTQGSMN 473

  Fly   700 SGQTNGHSKTNGSHTNGSASSSVHVNNSKQ 729
            :||..||        .||..|....|.:||
  Rat   474 TGQLCGH--------GGSQRSKKRKNKNKQ 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
scnyNP_729092.1 Peptidase_C19E 171..477 CDD:239126 107/311 (34%)
UCH 172..477 CDD:278850 106/310 (34%)
Asp-B-Hydro_N <617..>731 CDD:191249 24/118 (20%)
LOC100910107XP_038953753.1 Peptidase_C19E 49..345 CDD:239126 108/312 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 210 1.000 Domainoid score I2718
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000177
OrthoInspector 1 1.000 - - otm46460
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24006
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.010

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