DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG10576 and Pa2g4

DIOPT Version :9

Sequence 1:NP_001286949.1 Gene:CG10576 / 38645 FlyBaseID:FBgn0035630 Length:391 Species:Drosophila melanogaster
Sequence 2:NP_001004206.1 Gene:Pa2g4 / 288778 RGDID:1302994 Length:394 Species:Rattus norvegicus


Alignment Length:386 Identity:212/386 - (54%)
Similarity:277/386 - (71%) Gaps:3/386 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MADVEKEPEKTIAEDLVVTKYKLAGEIVNKTLKAVIGLCVVDASVREICTQGDNQLTEETGKVYK 65
            |:..:::.|:||||||||||||:.|:|.|:.|::::.......||..:|.:||..:.|||||::|
  Rat     1 MSGEDEQQEQTIAEDLVVTKYKMGGDIANRVLRSLVEASSSGVSVLSLCEKGDAMIMEETGKIFK 65

  Fly    66 KEKDLKKGIAFPTCLSVNNCVCHFSPAKNDADYTLKAGDVVKIDLGAHIDGFIAVAAHTIVVGAA 130
            |||::||||||||.:|||||||||||.|:|.||.||.||:||||||.|:|||||..|||.|:|.|
  Rat    66 KEKEMKKGIAFPTSISVNNCVCHFSPLKSDQDYILKEGDLVKIDLGVHVDGFIANVAHTFVIGVA 130

  Fly   131 ADQKISGRQADVILAAYWAVQAALRLLKSGANNYSLTDAVQQISESYKCKPIEGMLSHELKQFKI 195
            ...:::||:||||.||:...:|||||:|.|..|..:|:|..:::.|:.|.||||||||:|||..|
  Rat   131 QGSQVTGRKADVIKAAHLCAEAALRLVKPGNQNTQVTEAWNKVAHSFNCTPIEGMLSHQLKQHVI 195

  Fly   196 DGEKTIIQNPSEAQRKEHEKCTFETYEVYAIDVIVSTGEGVGREKDTKVSIYKKS-EENYMLKMK 259
            ||||||||||::.|:|:|||..||.:||||:||:||:|||..::...:.:|||:. .:.|.||||
  Rat   196 DGEKTIIQNPTDQQKKDHEKAEFEVHEVYAVDVLVSSGEGKAKDAGQRTTIYKRDPSKQYGLKMK 260

  Fly   260 ASRALLAEVKTKYGNMPFNIRSFEEETKARMGVVECVGHKMIEPFQVLYEKPSEIVAQFKHTVLL 324
            .|||..:||:.::..|||.:|:||:|.|||||||||..|::::||.|||||..|.|||||.||||
  Rat   261 TSRAFFSEVERRFDAMPFTLRAFEDEKKARMGVVECAKHELLQPFNVLYEKEGEFVAQFKFTVLL 325

  Fly   325 MPNGVNLVTGIPFEAENYVSEYSVAQEELKTLLAQPLGPVKGKGKGKKA--TAGAATKVET 383
            ||||...:|..|||.:.|.||..|...|||.||.........|.|.|||  ||..||..||
  Rat   326 MPNGPMRITSGPFEPDLYKSEMEVQDAELKALLQSSASRKTQKKKKKKASKTAENATSGET 386

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG10576NP_001286949.1 APP_MetAP 3..361 CDD:294199 200/358 (56%)
Pa2g4NP_001004206.1 crvDNA_42K 1..388 CDD:273105 212/386 (55%)
Necessary for nucleolar localization. /evidence=ECO:0000250|UniProtKB:Q9UQ80 2..48 19/45 (42%)
RNA-binding. /evidence=ECO:0000250|UniProtKB:Q9UQ80 46..54 2/7 (29%)
Necessary for nucleolar localization. /evidence=ECO:0000250|UniProtKB:Q9UQ80 301..394 45/86 (52%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 358..394 12/29 (41%)
Interaction with RNA. /evidence=ECO:0000250|UniProtKB:P50580 361..375 4/13 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 261 1.000 Domainoid score I1898
eggNOG 1 0.900 - - E1_COG0024
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4513
Inparanoid 1 1.050 424 1.000 Inparanoid score I1711
OMA 1 1.010 - - QHG54050
OrthoDB 1 1.010 - - D375525at33208
OrthoFinder 1 1.000 - - FOG0002945
OrthoInspector 1 1.000 - - otm44843
orthoMCL 1 0.900 - - OOG6_101895
Panther 1 1.100 - - LDO PTHR10804
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1946
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.840

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