DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp47 and Usp47

DIOPT Version :9

Sequence 1:NP_523937.2 Gene:Usp47 / 38644 FlyBaseID:FBgn0016756 Length:1556 Species:Drosophila melanogaster
Sequence 2:XP_006508336.1 Gene:Usp47 / 74996 MGIID:1922246 Length:1396 Species:Mus musculus


Alignment Length:1527 Identity:485/1527 - (31%)
Similarity:709/1527 - (46%) Gaps:307/1527 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   161 DSLAKTSISSESSPEK---------TSKIKTTAAKISKPGSEKAPRASPEECPELSTEINSKNTS 216
            |.:.|..:..|::.|:         |:..||.:.:|                        :.|..
Mouse    25 DEMKKKFLQIENAAEEPRVLCIIQDTTNSKTVSERI------------------------TLNLP 65

  Fly   217 SESPVAKKTAKVTSK-----PTLELLSPIKPSSPIKELDCEPVDTLSKQQLSEQLQLYPQGRNL- 275
            :.:||.|....|.:|     .|.:|..    .:.:...|..|:|..|.:.|.: ....|..:|. 
Mouse    66 ASTPVRKLFEDVANKVGYINGTFDLTR----ENGVTTADMAPLDHTSDKSLLD-ANFEPGKKNFL 125

  Fly   276 -ISPVDDAPSDLFISDAEQLSDDDLALGASASPTMLGPGYDYGAPTGDSDVEGVTGVTDPSTIGT 339
             ::..|..|..:.:.|:..:.|       |.....:||     .|.                   
Mouse   126 HLTDKDGEPPQMLLEDSNNVDD-------SVHDRFIGP-----LPR------------------- 159

  Fly   340 DDGTYPALSNFYRRKYGGDELRAWQRVNTTGADFVSSATTETEAEARQASLGPRGYVGLVNQAMT 404
             :|:..:.:::..:.|.                 .||...::|.          |||||||||||
Mouse   160 -EGSVASTNDYVSQNYS-----------------YSSILNKSET----------GYVGLVNQAMT 196

  Fly   405 CYLNSLLQALFMTPEFRNALYRWEFDNDNE--AKNIPYQLQKLFLNLQTSPKAAVETTDLTRSFG 467
            ||||||||.||||||||||||:|||::..|  ..:||||||:||:.||||.|.|:||||:|||||
Mouse   197 CYLNSLLQTLFMTPEFRNALYKWEFEDSEEDPVTSIPYQLQRLFVLLQTSKKRAIETTDVTRSFG 261

  Fly   468 WDSTEAWQQHDIQELCRVMFDALEHKFKNTKQANLISNLYEGKMNDYVKCLECNTEKTREDTFLD 532
            |||:|||||||:||||||||||||.|:|.|:||:||:.||:||:.|||:||||..|..|.||:||
Mouse   262 WDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINELYQGKLKDYVRCLECGYEGWRIDTYLD 326

  Fly   533 IPLPVRPFGSSSAYGSIEEALRAFVQPETLDGNNQYLCEKCKKKCDAHKGLHFKSFPYILTLHLK 597
            |||.:||:|||.|:.|:||||.||:|||.|||.|||.||:|||||||.|||.|..|||:|||.||
Mouse   327 IPLVIRPYGSSQAFASVEEALHAFIQPEILDGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLK 391

  Fly   598 RFDFDYQTMHRIKLNDRVTFPQTLNLNTFINRSGNSGEQNSQLNGTVDDCSTADSGSAMEDDNLS 662
            ||||||.||||||||||::||:.|:::|||:.......|..         |..|||:..|.    
Mouse   392 RFDFDYTTMHRIKLNDRMSFPEELDMSTFIDIEDEKSPQTE---------SCTDSGAENEG---- 443

  Fly   663 SGVVTTASSSQHENDLNDE---DEGI--DMSSSTSKSAKQG----------------------SG 700
                 :..|.|..||.:.:   ||||  :.||.:.|.:|.|                      ..
Mouse   444 -----SCHSDQMSNDFSTDDAVDEGICLESSSGSEKISKPGLEKVEMAETDQRKDPIQFQLGEPN 503

  Fly   701 PYLYELFAIMIHSGSASGGHYYAYIKDFDNNEWFCFNDQNVTSITQEDIQRSFGGPNGS--YYSS 763
            ..:||||::|:|||||:||||||.||.|.:::|:.||||:|:.||||||:::.||.:||  ||||
Mouse   504 SLMYELFSVMVHSGSAAGGHYYACIKSFSDDQWYSFNDQHVSRITQEDIKKTHGGSSGSRGYYSS 568

  Fly   764 AYTSSTNAYMLMYRQVDAKRNELVAKVADFPEHIKTLLPKLH--SEEETRVSRLGRHITVTDLAL 826
            |:.||||||||:||..|..||....:|.::|||||.|:.|..  .|:|.|...:.|:..      
Mouse   569 AFASSTNAYMLIYRLKDPTRNAKFLEVDEYPEHIKNLVQKERELEEQEKRQREIERNTC------ 627

  Fly   827 PDLYKPRVYFYNPSLKKMKITRVYVSQSFNINLVLMSAYEMLNVEQFAPLSRCRLVAYNSSMDTI 891
                |.:::..:|..:.|...::.|.:...:...:..||:|:::|...||..||||.|:...|.:
Mouse   628 ----KIKLFCLHPVKQVMMENKLEVHKDKTLKEAVEMAYKMMDLEDVIPLDCCRLVKYDEFHDYL 688

  Fly   892 IQSLESCTDPALTELRAA--QNYSLDFLLEYRAEDQEFEVYPPNGITWYVFKVDLSTMAMDGPFL 954
            .:|.|...|..:..|...  ..|..|.|||.|..||.|:.|.|..:...|..|||....:..|..
Mouse   689 ERSYEGEEDTPMGLLLGGVKSTYMFDLLLETRKPDQIFQSYKPGEVMVKVHVVDLKAETVAAPVT 753

  Fly   955 VYSAAREREASDVLRRSIALRLHISEQQFLLATVRA-------TVP-------------KAFVSY 999
            |  .|...:.....::.|:...|:......:...|.       ::|             |.||..
Mouse   754 V--RAYLNQTVTEFKQLISKATHLPADSMRIVLERCYNDLRLLSMPSKTLKAEGFFRSNKVFVES 816

  Fly  1000 D---PHPTPEALQHLQNMANTQFKSITYFYLNVP---------------------NTD------- 1033
            .   .|.......||..:.:....:|..|.| :|                     |.|       
Mouse   817 SETVDHQAAFTDSHLWKLLDRHANTIRLFVL-LPEQSPGSYSKRTAYQKAGGDSGNVDDDCERVK 880

  Fly  1034 --AATLEMLGVPTVESVECASG---------GDVVDAAMMNGVAPGHMSSSNDYDWRRYKRDLVE 1087
              |..|:.:.....||.|....         ||..|::          .|:...|:...:..|.|
Mouse   881 GPAGNLKSVDAILEESTEKLKSLSLQQQQQDGDNGDSS----------KSTETSDFENIESPLNE 935

  Fly  1088 PMSQPSPSH----GHESNSEDSSLSDGDRTLVETDNMAHRGGGDSQVSSTSHSPQLSSPEDEAAS 1148
            ..|..|..:    .|...|:..:....:|:..:.:|.......||.:.|:|||..          
Mouse   936 RGSSTSVDNRELEQHIQTSDPENFQSEERSDSDVNNDRSTSSVDSDILSSSHSSD---------- 990

  Fly  1149 HDAMMRVHAYCNGNGS-YAAADVVDPLLLPTSTNHFFYATKVECVDVVGTGSSSGHQSDEEAQLR 1212
                    ..||.:.: ...|:.:|...:.:|........|.|..|.....|.:..:.||..:.|
Mouse   991 --------TLCNADSAQIPLANGLDSHSITSSRRTKANEGKKETWDTAEEDSGTDSEYDESGKSR 1047

  Fly  1213 ----------KPTRA-------YKLL---VGTHMRMGAFKKHIEQLIQVPAAHFKLQRKHDNNL- 1256
                      .|..|       :|.|   |...:.:.|||:|:|..:.|.::|||:.|.:.:|. 
Mouse  1048 GDMQYMYFKADPYTADEGSGEGHKWLMVHVDKRITLAAFKQHLEPFVGVLSSHFKVFRVYTSNQE 1112

  Fly  1257 --SNNQNNSLVHLIEGETLTVELGKTLEPDEFKAKIHFLRLADIDNETSKLPCVCEWVYNANTTA 1319
              :...|.:|....:...:|:.||:.|:..|::.|:..|    :.||......:.:.|:....|.
Mouse  1113 FETVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVCQL----LVNEQEPCKFLLDAVFAKGMTV 1173

  Fly  1320 EQAKKELVAKLHR---IDAKYATLSVQNCRIWLKGGRIPIKILSDDETLYCDMRSSIAAEFIVQE 1381
            .|:|:||:.:|..   :|     ||:...|:..|..:.|..:..|......|:..|...| :..|
Mouse  1174 RQSKEELIPQLREQCGLD-----LSIDRFRLRKKTWKNPGTVFLDYHIYEEDINISSNWE-VFLE 1232

  Fly  1382 CEEEVDPQPKDDSLTLFVRRWCPAKLEFGKFQEITLDQDS--EIRLSLSQISDIPIDKLSYMKLN 1444
            ..:.|:.......|.:..|||.||:::...|||:.|:.:|  |:|..||:||.||::.:.:.|..
Mouse  1233 VLDGVEKMKSMSQLAILTRRWRPAEMKLDPFQELVLESNSVDELREKLSEISGIPLEDIEFAKGR 1297

  Fly  1445 SNFPCTSISALSVNESSSWYSVPTTLDKYPLNSTQTGNIYLYKDRTVPARELTLEERRLMNAREK 1509
            ..||| .||.|.:::...|....:||:.:||.....|.:..|:|||....|||.|:|..:..:|.
Mouse  1298 GTFPC-DISVLDIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRDRTEEVMELTDEQRNELMKKES 1361

  Fly  1510 ARLDRVGCVSTTRYAQRRERALKIYLD-SPEK 1540
            :||.:.|  ....|:.|:|:||||||| :|.|
Mouse  1362 SRLQKTG--HRVTYSPRKEKALKIYLDGAPNK 1391

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp47NP_523937.2 TEBP_beta <119..234 CDD:254188 14/86 (16%)
Rib_recp_KP_reg 122..265 CDD:282899 21/117 (18%)
peptidase_C19C 394..780 CDD:239124 241/416 (58%)
UCH 395..776 CDD:278850 238/411 (58%)
Usp47XP_006508336.1 peptidase_C19C 186..586 CDD:239124 209/428 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850691
Domainoid 1 1.000 474 1.000 Domainoid score I441
eggNOG 1 0.900 - - E1_COG5077
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9929
Inparanoid 1 1.050 686 1.000 Inparanoid score I702
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG47402
OrthoDB 1 1.010 - - D387934at33208
OrthoFinder 1 1.000 - - FOG0006160
OrthoInspector 1 1.000 - - oto94648
orthoMCL 1 0.900 - - OOG6_106012
Panther 1 1.100 - - LDO PTHR24006
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3900
SonicParanoid 1 1.000 - - X4445
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.800

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