DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp47 and usp7

DIOPT Version :10

Sequence 1:NP_523937.2 Gene:Usp47 / 38644 FlyBaseID:FBgn0016756 Length:1556 Species:Drosophila melanogaster
Sequence 2:XP_009297739.4 Gene:usp7 / 553758 ZFINID:ZDB-GENE-030131-3656 Length:1130 Species:Danio rerio


Alignment Length:1159 Identity:265/1159 - (22%)
Similarity:431/1159 - (37%) Gaps:387/1159 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   350 FYRRK--YGGDELRAWQRVNTTGADFV--SSATTE--TEAEARQA----SLGPRGYVGLVNQAMT 404
            |:.::  :|.....:|..|......||  ...|.|  .:|:|...    |....|||||.||..|
Zfish   179 FFHKENDWGFSNFMSWSDVTDPERGFVEDDKVTFEVYVQADAPHGVAWDSKKHTGYVGLKNQGAT 243

  Fly   405 CYLNSLLQALFMTPEFRNALYRWEFDNDNEAKNIPYQLQKLFLNLQTSPKAAVETTDLTRSFGWD 469
            ||:|||||.||.|.:.|.|:|....:.|:.:|::|..||::|..||.|.| .|.|..||:||||:
Zfish   244 CYMNSLLQTLFFTNQLRRAVYMMPTEGDDSSKSVPLALQRVFYELQHSDK-PVGTKKLTKSFGWE 307

  Fly   470 STEAWQQHDIQELCRVMFDALEHKFKNTKQANLISNLYEGKMNDYVKCLECNTEKTREDTFLDIP 534
            :.:::.|||:||||||:.|.:|:|.|.|.....|..|:.|||..|::|...:....|.:.:.||.
Zfish   308 TLDSFMQHDVQELCRVLLDNVENKMKGTCVEGTIPKLFRGKMVSYIQCKHVDYRSERIEDYYDIQ 372

  Fly   535 LPVRPFGSSSAYGSIEEALRAFVQPETLDGNNQYLCEKCKKKCDAHKGLHFKSFPYILTLHLKRF 599
            |.::  |..:.:    |:.:.:|..|.|||:|:|...:...: :|.||:.|.:||.||.|.|.||
Zfish   373 LSIK--GKKNIF----ESFKDYVAVEQLDGDNKYDAGEHGLQ-EAEKGVKFLTFPPILHLQLMRF 430

  Fly   600 DFDYQTMHRIKLNDRVTFPQTLNLNTFINRSGNSGEQNSQLNGTVDDCSTADSGSAMEDDNLSSG 664
            .:|.||...||:|||..||:.|.|:.|:.:.                                  
Zfish   431 MYDPQTDQNIKINDRFEFPEQLPLDEFLQKP---------------------------------- 461

  Fly   665 VVTTASSSQHENDLNDEDEGIDMSSSTSKSAKQGSGPYLYELFAIMIHSGSASGGHYYAYIKDFD 729
                        |:.|                    |..|.|.|:::|||...||||..|:....
Zfish   462 ------------DVKD--------------------PANYILHAVLVHSGDNHGGHYVVYLNPKG 494

  Fly   730 NNE-------WFCFNDQNVTSITQED-IQRSFGGPNGSYYSSAYTSSTNAYMLMYRQVDAKRNEL 786
            :.:       |..|:|..|:..|:|: .:.::||.:...   :....||||||:|.: ::|.:|:
Zfish   495 DGKVSVTAPIWCKFDDDVVSRCTKEEATEHNYGGHDDDL---SVRHCTNAYMLVYIR-ESKLSEV 555

  Fly   787 VAKVA--DFPEH-IKTLLPKLHSEEETRVSRLGRHI-----TVTDLAL-----PDLYKPRVYFYN 838
            :..|.  |.|:. ::.|..:...|.:.|..|...|:     .||:...     .|:|..      
Zfish   556 LQPVTDMDIPQQLVERLQEEKRVEAQKRKERQEAHLYMQVQMVTEDQFCGHQGNDMYDE------ 614

  Fly   839 PSLKKMKITRVYVSQSFNINLVLMSAYEMLNVEQFA--PLSRCRLVAYNSSMDTIIQSLESCTD- 900
               :|:|.|...|.:|..:      |..:.|:.|..  |..:.||..        :|:..:.|. 
Zfish   615 ---EKVKYTVFKVLKSSTL------AEFVQNLSQTMGFPQDQMRLWP--------MQARSNGTKR 662

  Fly   901 PALTELRAAQNYSLDFLLEYRAEDQEFEVYPPNGITWYVFKVDLSTMAMDGPFLVYSAAREREAS 965
            ||:.:..|..|.|:                           :|||.  .:.|:.::....:.|  
Zfish   663 PAMLDYEADCNKSM---------------------------IDLSD--NENPWTIFLETVDPE-- 696

  Fly   966 DVLRRSIALRLHISEQQFLLATVRATVPKAFVSYDPHPTPEALQHLQNMANTQFKSITYF-YLNV 1029
                               :|...||:||....:|       :.....|.:.:.:|:.|. ::..
Zfish   697 -------------------MAASGATLPKFDKDHD-------VMLFLKMYDPKTRSLNYCGHIYT 735

  Fly  1030 PNTDAATLEMLGVPTVESVECASGG--DVVDAAMMNGVAPGHMSSSNDYDWRRYKRDLVEPMSQP 1092
            | ......::|      .|.|...|  ......:...|.|.......|||               
Zfish   736 P-ISCKIRDLL------PVMCERAGFQQGTSLILYEEVKPNLTERIQDYD--------------- 778

  Fly  1093 SPSHGHESNSEDSSLS---DGDRTLVETDNMAHRGGGDSQVSSTSHSPQLSSPEDEAASHDAMMR 1154
                    .|.|.:|.   |||..:.:.|:                      ||::.:.      
Zfish   779 --------VSLDKALDELMDGDIIVFQKDD----------------------PENDTSE------ 807

  Fly  1155 VHAYCNGNGSYAAADVVDPLLLPTSTNHF--FYATKVECVDVVGTGSSSGHQSDEEAQLRKPTRA 1217
                                 |||:.::|  .|    ..|||:....:..:...           
Zfish   808 ---------------------LPTAKDYFRDLY----HRVDVIFCDKTIHNDPG----------- 836

  Fly  1218 YKLLVGTHMRMGAFK--KHIEQ-------LIQVPAAHFKLQRKHDNNLSNNQNNSLVHLIEGETL 1273
              .:|....||..|:  |.:.|       |:|    .||.|...|     ...|.|.|..|| ||
Zfish   837 --FVVTLSNRMNYFQVAKTVAQRLNTDPMLLQ----FFKSQGYRD-----GPGNPLRHNYEG-TL 889

  Fly  1274 TVELGKTLEPDEFKAKIHF----LRLADIDNETSKLPCVCEWVYNANTTAEQAKKELVAKLHRID 1334
            . :|.:..:|.:.| |:::    :::.|.:|..|         :.|                   
Zfish   890 R-DLLQFFKPRQPK-KLYYQQLKMKITDFENRRS---------FKA------------------- 924

  Fly  1335 AKYATLSVQNCRIWLKGGRIPIKILSDDE-TLYCDMRSSIAAEFIVQECEEEVDPQPK-DDSLTL 1397
                        |||.      .:..::| |||.|....:  ..:::||::.|:...| .:.|.|
Zfish   925 ------------IWLN------SMFREEEITLYPDKHGCV--RDLLEECKKAVELSDKGSEKLRL 969

  Fly  1398 FVRRWCPAKLEFGKFQEITLDQDSEIRLSLS-------QISDIPIDKLSYMKLN 1444
                     ||...::.|.:.|:.|:...||       :|.:||:|::...|.|
Zfish   970 ---------LEIVSYKIIGVHQEDELLECLSPAASRTFRIEEIPLDQVDLDKEN 1014

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp47NP_523937.2 DUF4045 <122..249 CDD:433066
peptidase_C19C 394..780 CDD:239124 127/393 (32%)
USP47_C 1300..1534 CDD:466158 30/154 (19%)
usp7XP_009297739.4 None
Blue background indicates that the domain is not in the aligned region.

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