DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Usp47 and usp7

DIOPT Version :9

Sequence 1:NP_523937.2 Gene:Usp47 / 38644 FlyBaseID:FBgn0016756 Length:1556 Species:Drosophila melanogaster
Sequence 2:XP_009297739.2 Gene:usp7 / 553758 ZFINID:ZDB-GENE-030131-3656 Length:1130 Species:Danio rerio


Alignment Length:1159 Identity:265/1159 - (22%)
Similarity:431/1159 - (37%) Gaps:387/1159 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   350 FYRRK--YGGDELRAWQRVNTTGADFV--SSATTE--TEAEARQA----SLGPRGYVGLVNQAMT 404
            |:.::  :|.....:|..|......||  ...|.|  .:|:|...    |....|||||.||..|
Zfish   179 FFHKENDWGFSNFMSWSDVTDPERGFVEDDKVTFEVYVQADAPHGVAWDSKKHTGYVGLKNQGAT 243

  Fly   405 CYLNSLLQALFMTPEFRNALYRWEFDNDNEAKNIPYQLQKLFLNLQTSPKAAVETTDLTRSFGWD 469
            ||:|||||.||.|.:.|.|:|....:.|:.:|::|..||::|..||.|.| .|.|..||:||||:
Zfish   244 CYMNSLLQTLFFTNQLRRAVYMMPTEGDDSSKSVPLALQRVFYELQHSDK-PVGTKKLTKSFGWE 307

  Fly   470 STEAWQQHDIQELCRVMFDALEHKFKNTKQANLISNLYEGKMNDYVKCLECNTEKTREDTFLDIP 534
            :.:::.|||:||||||:.|.:|:|.|.|.....|..|:.|||..|::|...:....|.:.:.||.
Zfish   308 TLDSFMQHDVQELCRVLLDNVENKMKGTCVEGTIPKLFRGKMVSYIQCKHVDYRSERIEDYYDIQ 372

  Fly   535 LPVRPFGSSSAYGSIEEALRAFVQPETLDGNNQYLCEKCKKKCDAHKGLHFKSFPYILTLHLKRF 599
            |.::  |..:.:    |:.:.:|..|.|||:|:|...:...: :|.||:.|.:||.||.|.|.||
Zfish   373 LSIK--GKKNIF----ESFKDYVAVEQLDGDNKYDAGEHGLQ-EAEKGVKFLTFPPILHLQLMRF 430

  Fly   600 DFDYQTMHRIKLNDRVTFPQTLNLNTFINRSGNSGEQNSQLNGTVDDCSTADSGSAMEDDNLSSG 664
            .:|.||...||:|||..||:.|.|:.|:.:.                                  
Zfish   431 MYDPQTDQNIKINDRFEFPEQLPLDEFLQKP---------------------------------- 461

  Fly   665 VVTTASSSQHENDLNDEDEGIDMSSSTSKSAKQGSGPYLYELFAIMIHSGSASGGHYYAYIKDFD 729
                        |:.|                    |..|.|.|:::|||...||||..|:....
Zfish   462 ------------DVKD--------------------PANYILHAVLVHSGDNHGGHYVVYLNPKG 494

  Fly   730 NNE-------WFCFNDQNVTSITQED-IQRSFGGPNGSYYSSAYTSSTNAYMLMYRQVDAKRNEL 786
            :.:       |..|:|..|:..|:|: .:.::||.:...   :....||||||:|.: ::|.:|:
Zfish   495 DGKVSVTAPIWCKFDDDVVSRCTKEEATEHNYGGHDDDL---SVRHCTNAYMLVYIR-ESKLSEV 555

  Fly   787 VAKVA--DFPEH-IKTLLPKLHSEEETRVSRLGRHI-----TVTDLAL-----PDLYKPRVYFYN 838
            :..|.  |.|:. ::.|..:...|.:.|..|...|:     .||:...     .|:|..      
Zfish   556 LQPVTDMDIPQQLVERLQEEKRVEAQKRKERQEAHLYMQVQMVTEDQFCGHQGNDMYDE------ 614

  Fly   839 PSLKKMKITRVYVSQSFNINLVLMSAYEMLNVEQFA--PLSRCRLVAYNSSMDTIIQSLESCTD- 900
               :|:|.|...|.:|..:      |..:.|:.|..  |..:.||..        :|:..:.|. 
Zfish   615 ---EKVKYTVFKVLKSSTL------AEFVQNLSQTMGFPQDQMRLWP--------MQARSNGTKR 662

  Fly   901 PALTELRAAQNYSLDFLLEYRAEDQEFEVYPPNGITWYVFKVDLSTMAMDGPFLVYSAAREREAS 965
            ||:.:..|..|.|:                           :|||.  .:.|:.::....:.|  
Zfish   663 PAMLDYEADCNKSM---------------------------IDLSD--NENPWTIFLETVDPE-- 696

  Fly   966 DVLRRSIALRLHISEQQFLLATVRATVPKAFVSYDPHPTPEALQHLQNMANTQFKSITYF-YLNV 1029
                               :|...||:||....:|       :.....|.:.:.:|:.|. ::..
Zfish   697 -------------------MAASGATLPKFDKDHD-------VMLFLKMYDPKTRSLNYCGHIYT 735

  Fly  1030 PNTDAATLEMLGVPTVESVECASGG--DVVDAAMMNGVAPGHMSSSNDYDWRRYKRDLVEPMSQP 1092
            | ......::|      .|.|...|  ......:...|.|.......|||               
Zfish   736 P-ISCKIRDLL------PVMCERAGFQQGTSLILYEEVKPNLTERIQDYD--------------- 778

  Fly  1093 SPSHGHESNSEDSSLS---DGDRTLVETDNMAHRGGGDSQVSSTSHSPQLSSPEDEAASHDAMMR 1154
                    .|.|.:|.   |||..:.:.|:                      ||::.:.      
Zfish   779 --------VSLDKALDELMDGDIIVFQKDD----------------------PENDTSE------ 807

  Fly  1155 VHAYCNGNGSYAAADVVDPLLLPTSTNHF--FYATKVECVDVVGTGSSSGHQSDEEAQLRKPTRA 1217
                                 |||:.::|  .|    ..|||:....:..:...           
Zfish   808 ---------------------LPTAKDYFRDLY----HRVDVIFCDKTIHNDPG----------- 836

  Fly  1218 YKLLVGTHMRMGAFK--KHIEQ-------LIQVPAAHFKLQRKHDNNLSNNQNNSLVHLIEGETL 1273
              .:|....||..|:  |.:.|       |:|    .||.|...|     ...|.|.|..|| ||
Zfish   837 --FVVTLSNRMNYFQVAKTVAQRLNTDPMLLQ----FFKSQGYRD-----GPGNPLRHNYEG-TL 889

  Fly  1274 TVELGKTLEPDEFKAKIHF----LRLADIDNETSKLPCVCEWVYNANTTAEQAKKELVAKLHRID 1334
            . :|.:..:|.:.| |:::    :::.|.:|..|         :.|                   
Zfish   890 R-DLLQFFKPRQPK-KLYYQQLKMKITDFENRRS---------FKA------------------- 924

  Fly  1335 AKYATLSVQNCRIWLKGGRIPIKILSDDE-TLYCDMRSSIAAEFIVQECEEEVDPQPK-DDSLTL 1397
                        |||.      .:..::| |||.|....:  ..:::||::.|:...| .:.|.|
Zfish   925 ------------IWLN------SMFREEEITLYPDKHGCV--RDLLEECKKAVELSDKGSEKLRL 969

  Fly  1398 FVRRWCPAKLEFGKFQEITLDQDSEIRLSLS-------QISDIPIDKLSYMKLN 1444
                     ||...::.|.:.|:.|:...||       :|.:||:|::...|.|
Zfish   970 ---------LEIVSYKIIGVHQEDELLECLSPAASRTFRIEEIPLDQVDLDKEN 1014

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp47NP_523937.2 TEBP_beta <119..234 CDD:254188
Rib_recp_KP_reg 122..265 CDD:282899
peptidase_C19C 394..780 CDD:239124 127/393 (32%)
UCH 395..776 CDD:278850 125/388 (32%)
usp7XP_009297739.2 Peptidase_C19 77..1128 CDD:321984 265/1159 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5077
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D387934at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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