Protein Alignment Usp47 and Usp1

DIOPT Version :9

• Sequence 1: NP_523937.2
• Gene: Usp47 / 38644
• FlyBaseID: FBgn0016756
• Length: 1556
• Species: Drosophila melanogaster
• Sequence 2: NP_001263061.1
• Gene: Usp1 / 43462
• FlyBaseID: FBgn0028476
• Length: 1078
• Species: Drosophila melanogaster
• Alignment Length: 927
• Identity: 169/927 - (18%)
• Similarity: 296/927 - (31%)
• Gaps: 300/927 - (32%)

  Fly   165 KTSISSESSPEKTSKIKTTAAKI--SKPGSEKAPRASPEECPELSTEINSKNTSSESPVAKKTAK 227
            :|.:..:::...:.....:||::  ::..|.|....|.::....:..:||.|..|.|  :|.|.:
  Fly   355 QTIVRQQTARSASLGKNVSAAQLEHARSWSSKDLATSTDQYSGQNGGVNSGNGGSGS--SKSTHQ 417

  Fly   228 VTSKPTLELLSPIKPSSPIKELDCEPVDTL--------------SKQQLSEQLQ-----LYPQGR 273
            ..::...||.:.:..:......:....|||              .:|...|.|.     :....:
  Fly   418 SVTEKLHELYNNLHGNEMADSTEPYHADTLLHAIQDVNATFEGNQQQDAHEFLMCVLNCIRETNQ 482

  Fly   274 NLISPVDDAPSDLFISDAEQLSDDDLALGASASPTML--GPGYDYGAPTGDSDVEGVTGVTDPST 336
            :||..:.:.|             :.:|.|..|:|..:  |.|.|....|...::....|     :
  Fly   483 SLIKAIGECP-------------EVIANGYIANPDEVDTGEGQDRTDSTASQNLNAGNG-----S 529

  Fly   337 IGTDDGTYPALSNFYRRKYGGDELRAWQRVNTTGADFVSSATTETEAEARQASLGPRGYVGLVNQ 401
            :.|...|....|.|.|:....||::             .|.:|..::..::.|....|..|
  Fly   530 LATSQTTTTKTSFFSRKSKRKDEVK-------------PSKSTRVQSPLKENSPTAGGITG---- 577

  Fly   402 AMTCYLNSLLQALFMTPEFRNALYRWEFDNDNEAKNIPYQLQKLFLN-LQTSPKAAVETTDLTRS 465
            |.|.:..:            |:|:                    :|| :..|..::...:..|.:
  Fly   578 AGTAHATA------------NSLF--------------------YLNTVDLSGASSTSGSASTSA 610

  Fly   466 FGWDSTEA----------WQQHDIQELCRVMFD--ALEHKFKNTKQANLISNLYEGKMNDYVKCL 518
            .|..||.|          :...|......|:.|  .||.:.:.. ..|..|:.:||.:....|||
  Fly   611 SGVVSTSAALPTPPQATKYSSDDEMNSATVLKDKMRLEERIREL-NLNFFSSDFEGIVVLTTKCL 674

  Fly   519 ECNTEKTREDTFLDIPLPVRPFGSSSAYGSIEEALRAFVQ-----PETLDGNNQYLCEKCKKKCD 578
            .|.|...::...|||.:||...|..:|  .:::....::|     .|...|.|:|.|.:|....:
  Fly   675 SCETITRQKQGMLDISVPVPISGYDNA--DLQDKPSTYIQNSCITKEYFRGENKYSCNQCTGYTE 737

  Fly   579 AHKGLHFKSFPYILTLHLKRFDFDYQTMHRIKLNDRVTFPQTLNLNTFINRSGNSGEQNSQLNGT 643
            |.:.:.::..|.:|.:.|.||....:     |::..|  |.|..|..|
  Fly   738 AIRSISYEVLPRLLVIQLNRFSGGME-----KVSTYV--PTTFTLPCF----------------- 778

  Fly   644 VDDCST-ADSGSAMEDDNLSSGVVTTASSSQHENDLNDEDEGIDMSSSTSKSAKQGSGPYLYELF 707
               |:| .:.|                                           :|:..::|:|:
  Fly   779 ---CATCCELG-------------------------------------------EGNKLHVYKLY 797

  Fly   708 AIMIHSGSA-SGGHYYAY------IKDFDNNEWFCFNDQNVTSITQEDIQRSFGGPNGSYYSSAY 765
            :::.|.|:. :.|||.||      ..|:.|    |..|:..|....:.:.           |.|.
  Fly   798 SVITHVGATLTVGHYIAYTCFLDLASDYVN----CPKDRRNTMTNSQTMA-----------SQAV 847

  Fly   766 TSSTNAYMLMYRQVDAKRNELVAKVADFPEHIKTLLPKLHSEEETRVSRLGRHITVTDLALPDLY 830
            .|:.|          |..|...:.||..|                        :.....||..
  Fly   848 PSNEN----------AAPNNGSSSVASTP------------------------VIAAASALAS-- 876

  Fly   831 KPRVYFYNPSLKKMKITRVYVS----QSFNINLV-------LMSAYEMLNVEQFAPLSRCRLVAY 884
                 ..|..:||||..|...|    .|.|:..|       :.:....|::........|..:..
  Fly   877 -----SGNILMKKMKFGRSKASSSGDMSKNVKQVNGIISKNITNGIGKLSISTTCQGVNCCAMRL 936

  Fly   885 NSSMDTIIQSLESCTDPALTELRAAQNYSLDFLLEYRAEDQEFEVYP------------------ 931
            ..:..|...:..||:|.:...|:...|.:|.|       ......||
  Fly   937 CCTQQTSSSNSTSCSDFSEESLQNGSNSNLSF-------GGSGSTYPTGYGSTGRGGVRANYAHG 994

  Fly   932 -PNGITWYVFKVDLSTMAMDGPFLVYSAAREREASDVL--RRSIALRLH-ISEQQFLLATVRATV 992
             |:.| ||:...|           ...|..:||..::|  .|.|.:..: :...:|.|...:||.
  Fly   995 GPDPI-WYMCDDD-----------KIKAMTQREFEELLSPTRKITITPYLLFYARFDLQPQKATP 1047

  Fly   993 PKAFVSYDPHPTPEALQ 1009
            |....|..| |.|.:.|
  Fly  1048 PMPGSSTTP-PPPSSAQ 1063

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Usp47	NP_523937.2	TEBP_beta	<119..234	CDD:254188	13/70 (19%)
		Rib_recp_KP_reg	122..265	CDD:282899	19/115 (17%)
		peptidase_C19C	394..780	CDD:239124	76/411 (18%)
		UCH	395..776	CDD:278850	75/406 (18%)
Usp1	NP_001263061.1	Peptidase_C19	308..819	CDD:271592	110/605 (18%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45456835
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR24006
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	2.030