Protein Alignment Usp47 and Usp30

DIOPT Version :9

• Sequence 1: NP_523937.2
• Gene: Usp47 / 38644
• FlyBaseID: FBgn0016756
• Length: 1556
• Species: Drosophila melanogaster
• Sequence 2: NP_001284912.1
• Gene: Usp30 / 31519
• FlyBaseID: FBgn0029819
• Length: 558
• Species: Drosophila melanogaster
• Alignment Length: 630
• Identity: 130/630 - (20%)
• Similarity: 221/630 - (35%)
• Gaps: 181/630 - (28%)

  Fly   203 CPELSTEINSKNTSSESPVAKKTAKVTSKPTLELLS---------PIKPSSPIKELDC----EPV 254
            ||:....:...|.:|..   :|:...:...|||:::         |..|.:.::.|:.    .|.
  Fly    60 CPQFIAWLQLYNNASPD---RKSLITSMLNTLEVVNGTHATLRGDPYSPGAVLRALNALGWVIPQ 121

  Fly   255 DTLSKQQL-------SEQLQLYPQGRNLISPVDDAPSDLFISDAEQLSDDDLALGASASPTMLGP 312
            :.....:|       .|:..:.||....:|  |..|:|         :||:.:|..:|:|.
  Fly   122 EEHDAHELFHVLLTCLEEEAIRPQPLGCLS--DALPTD---------NDDNSSLAGTATPV---- 171

  Fly   313 GYDYGAPTGDSDVEGVTGVTDPSTIGTDDGTYPA---LSNFYRRKYGGDELRAWQRVNTTGADFV 374
                |.....|.:  ..|:.....|| |....|:   |::|...:|  ||..:.||:..:.|...
  Fly   172 ----GGFRSFSSM--AAGLGASQRIG-DQPNRPSSAMLTDFLNMEY--DESTSLQRLVRSEAHTP 227

  Fly   375 SSATTETEAEARQASLGPRGYVGLVNQAMTCYLNSLLQAL-----FMTPEFRNALYRWEFDNDNE 434
            .|..:..|.:... .||                :.||.|:     |..|...|
  Fly   228 DSPASVCERDGND-RLG----------------SVLLDAVSPGTPFGFPLVSN------------ 263

  Fly   435 AKNIPYQLQKLFLNLQTSPKAAVETTDLTRSFGWDSTEAWQQHD------IQELCRVMFDALEHK 493
                |..|....|..:.|.:..:             .::.||.|      :...||    :||..
  Fly   264 ----PDSLATPMLGGERSSRPRL-------------PQSQQQQDEGLNRRVSSSCR----SLERL 307

  Fly   494 FKNTKQANLISNL--------YEGKMNDYVKCLECNTEK-TREDTFLDIPLPVRPFGSSSAYGSI 549
            .:...:.::.||:        ::|.|...:.|..|.::. .|.|.|..|.|.:.|...:..  |:
  Fly   308 HRGPGRVSIWSNMMPSQVAHPFQGAMGAQIVCNGCGSKSAVRYDKFDSITLNLPPQRRTGL--SL 370

  Fly   550 EEALRAFVQPETLDGNNQYLCEKCKKKCDAHKGLHFKSFPYILTLHLKRFDFDYQTMHRIKLNDR 614
            ...|..::..|.|   :...|:.|.:.....|.:.|...|..|.:|:.|..: ..|....|..|.
  Fly   371 GHLLSEYITSEDL---SDVKCDSCNETTTHTKSVTFAKLPACLCIHVARTVW-LPTGQVCKRKDY 431

  Fly   615 VTFPQTLNLNTFINRSGNSGEQNSQLNGTVDDCSTADSGSAMEDDNLSSGVVTTASSSQHENDLN 679
            |.||::|::..:   |......|||. ||       ..||.|          :..|||...|  |
  Fly   432 VHFPESLSMAPY---SFVQPHLNSQA-GT-------PWGSTM----------SLYSSSLPMN--N 473

  Fly   680 DEDEGIDMSSSTSKSAKQGSGPYLYELFAIMIHSGSASGGHYYAYIKDFDNN--EWFCFNDQNVT 742
            ....|....:...|:        ||.|.|:::|||.|:.||:..|.:....|  .|:..:|..|.
  Fly   474 GVGGGEGFGTMFPKN--------LYRLLAVVVHSGEANSGHFVTYRRGSLRNAHRWYYTSDTIVR 530

  Fly   743 SITQEDIQRSFGGPNGSYYSSAYTSSTNAYMLMY-----RQVDAK 782
            .::.:::                 .|..||:|.|     ||::.:
  Fly   531 EVSIDEV-----------------LSVPAYLLFYDRGQQRQLNLR 558

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Usp47	NP_523937.2	TEBP_beta	<119..234	CDD:254188	5/30 (17%)
		Rib_recp_KP_reg	122..265	CDD:282899	13/81 (16%)
		peptidase_C19C	394..780	CDD:239124	86/412 (21%)
		UCH	395..776	CDD:278850	83/402 (21%)
Usp30	NP_001284912.1	Peptidase_C19	39..>139	CDD:271592	13/81 (16%)
		UCH	<304..547	CDD:278850	68/296 (23%)
		Peptidase_C19F	<323..548	CDD:239127	64/278 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45456904
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR24006
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.940