DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Usp47 and ubp8

DIOPT Version :10

Sequence 1:NP_523937.2 Gene:Usp47 / 38644 FlyBaseID:FBgn0016756 Length:1556 Species:Drosophila melanogaster
Sequence 2:NP_592992.1 Gene:ubp8 / 2542135 PomBaseID:SPAC13A11.04C Length:449 Species:Schizosaccharomyces pombe


Alignment Length:403 Identity:80/403 - (19%)
Similarity:145/403 - (35%) Gaps:125/403 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   394 GYVGLVNQAMTCYLNSLLQALFMTPEFRNALYRWEFDNDNEAKN---IPYQLQKLFLNLQTSP-K 454
            |..|:.|...||:::.:||::...|..|| |:...|....:.|.   :...:..:|.::..|. |
pombe   143 GLRGIQNLGATCFMSVILQSILHNPLVRN-LFFSGFHTSTDCKRPTCMTCAIDDMFSSIYNSKNK 206

  Fly   455 AAVETTDLTRSFGWDSTEA---WQQHDIQELCRVMFDALEHKFKNTKQAN--------LISNLYE 508
            :.........:..|..:::   :.|.|..|....:.|.:     :|:...        .|..::.
pombe   207 STFYGPTAVLNLMWKLSKSLCGYSQQDGHEFFVYLLDQM-----HTESGGGTSMPCTCPIHRIFS 266

  Fly   509 GKMNDYVKCLECNTEKTREDTFLDIPLPVRPFGSSSAYGSIEEALRAFVQPETLDGNNQYLCEKC 573
            |.:.:.|.||:|..|:...|..:||.|.:..       .:::..|..||..|.:    ||.|..|
pombe   267 GSLKNVVTCLDCKKERVAVDPLMDISLDINE-------PTLQGCLERFVSKEKV----QYSCHSC 320

  Fly   574 KKKCDAHKGLHFKSFPYILTLHLKRFDFDYQTMHRIKLNDRVTFPQTLNLNTFINRSGNSGEQNS 638
            ..| :|.|.|.|...|..:.:.||||:.:...| ..|::.:|::|..|.:....|          
pombe   321 GSK-NAIKQLVFDKLPPTICMQLKRFEQNNFAM-STKIDKQVSYPAFLRMRYNFN---------- 373

  Fly   639 QLNGTVDDCSTADSGSAMEDDNLSSGVVTTASSSQHENDLNDEDEGIDMSSSTSKSAKQGSGPYL 703
                              :||                         :|                 
pombe   374 ------------------QDD-------------------------VD----------------- 378

  Fly   704 YELFAIMIHSGSASGGHYYAYIKDFDNNEWFCFNDQNVTSITQEDIQRSFGGPNGSYYSSAYTSS 768
            |:|::::.|.|:...|||.||  .:..|:||..:|..:..:.:.::..|                
pombe   379 YQLYSVVCHKGTLDTGHYIAY--TYYQNQWFLLDDTTIVEVKESEVLNS---------------- 425

  Fly   769 TNAYMLMY--RQV 779
             .||:|.|  ||:
pombe   426 -QAYLLFYHERQI 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp47NP_523937.2 DUF4045 <122..249 CDD:433066
peptidase_C19C 394..780 CDD:239124 80/403 (20%)
USP47_C 1300..1534 CDD:466158
ubp8NP_592992.1 ZnF_UBP 37..85 CDD:197632
Peptidase_C19D 145..433 CDD:239125 76/395 (19%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.