DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Usp47 and Usp7

DIOPT Version :9

Sequence 1:NP_523937.2 Gene:Usp47 / 38644 FlyBaseID:FBgn0016756 Length:1556 Species:Drosophila melanogaster
Sequence 2:XP_006522201.1 Gene:Usp7 / 252870 MGIID:2182061 Length:1143 Species:Mus musculus


Alignment Length:1159 Identity:260/1159 - (22%)
Similarity:432/1159 - (37%) Gaps:372/1159 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   340 DDGTYP-ALSNFYRRK---YGGDELRAWQRVNTTGADFV--SSATTE--TEAEARQA----SLGP 392
            ||.::. .:|:.:..|   :|.....||..|......|:  ...|.|  .:|:|...    |...
Mouse   187 DDKSFSRRISHLFFHKENDWGFSNFMAWSEVTDPEKGFIDDDKVTFEVFVQADAPHGVAWDSKKH 251

  Fly   393 RGYVGLVNQAMTCYLNSLLQALFMTPEFRNALYRWEFDNDNEAKNIPYQLQKLFLNLQTSPKAAV 457
            .|||||.||..|||:|||||.||.|.:.|.|:|....:.|:.:|::|..||::|..||.|.| .|
Mouse   252 TGYVGLKNQGATCYMNSLLQTLFFTNQLRKAVYMMPTEGDDSSKSVPLALQRVFYELQHSDK-PV 315

  Fly   458 ETTDLTRSFGWDSTEAWQQHDIQELCRVMFDALEHKFKNTKQANLISNLYEGKMNDYVKCLECNT 522
            .|..||:||||::.:::.|||:||||||:.|.:|:|.|.|.....|..|:.|||..|::|.:.:.
Mouse   316 GTKKLTKSFGWETLDSFMQHDVQELCRVLLDNVENKMKGTCVEGTIPKLFRGKMVSYIQCKDVDY 380

  Fly   523 EKTREDTFLDIPLPVRPFGSSSAYGSIEEALRAFVQPETLDGNNQYLCEKCKKKCDAHKGLHFKS 587
            ...|.:.:.||.|.::  |..:.:.|..:    :|..|.|||:|:|...:...: :|.||:.|.:
Mouse   381 RSDRREDYYDIQLSIK--GKKNIFESFVD----YVAVEQLDGDNKYDAGEHGLQ-EAEKGVKFLT 438

  Fly   588 FPYILTLHLKRFDFDYQTMHRIKLNDRVTFPQTLNLNTFINRSGNSGEQNSQLNGTVDDCSTADS 652
            .|.:|.|.|.||.:|.||...||:|||..||:.|.|:.|:.::                      
Mouse   439 LPPVLHLQLMRFMYDPQTDQNIKINDRFEFPEQLPLDEFLQKT---------------------- 481

  Fly   653 GSAMEDDNLSSGVVTTASSSQHENDLNDEDEGIDMSSSTSKSAKQGSGPYLYELFAIMIHSGSAS 717
                                    |..|                    |..|.|.|:::|||...
Mouse   482 ------------------------DPKD--------------------PANYILHAVLVHSGDNH 502

  Fly   718 GGHYYAYIKDFDNNEWFCFNDQNVTSITQED-IQRSFGGPNGSYYSSAYTSSTNAYMLMYRQVDA 781
            ||||..|:....:.:|..|:|..|:..|:|: |:.::||.:...   :....||||||:|.: ::
Mouse   503 GGHYVVYLNPKGDGKWCKFDDDVVSRCTKEEAIEHNYGGHDDDL---SVRHCTNAYMLVYIR-ES 563

  Fly   782 KRNELVAKVA--DFPEHIKTLLPKLHSEEETRVSRLGRHITVTDLALPDLYKPRVYFYNPSLKKM 844
            |.:|::..|.  |.|:.:...|     :||.|:....|                        |:.
Mouse   564 KLSEVLQAVTDHDIPQQLVERL-----QEEKRIEAQKR------------------------KER 599

  Fly   845 KITRVYVSQSFNINLVLMSAY------EMLNVEQFAPLSRCRLVAY----NSSMDTIIQSLESCT 899
            :...:|:    .:.:|....:      :|.:.|      :.|...:    |||:...:|||....
Mouse   600 QEAHLYM----QVQIVAEDQFCGHQGNDMYDEE------KVRYTVFKVLKNSSLAEFVQSLSQTM 654

  Fly   900 DPALTELRAAQNYSLDFLLEYRAEDQEFEVYPPNGITWYVFKVDLSTMAMDGPFLVYSAAREREA 964
            .....::|.       :.::.|:...:......|........::||.  .:.|:.::....:.| 
Mouse   655 GFPQDQIRL-------WPMQARSNGTKRPAMLDNEADGNKTMIELSD--NENPWTIFLETVDPE- 709

  Fly   965 SDVLRRSIALRLHISEQQFLLATVRATVPKAFVSYDPHPTPEALQHLQNMANTQFKSITYF-YLN 1028
                                ||...||:||....:|       :.....|.:.:.:|:.|. ::.
Mouse   710 --------------------LAASGATLPKFDKDHD-------VMLFLKMYDPKTRSLNYCGHIY 747

  Fly  1029 VPNTDAATLEMLGVPTVESVECASGGDVVDAAMM--NGVAPGHMSSSNDYDWRRYKRDLVEPMSQ 1091
            .| ......::|      .|.|...|.:.|.:::  ..|.|.......|||              
Mouse   748 TP-ISCKIRDLL------PVMCDRAGFIQDTSLILYEEVKPNLTERIQDYD-------------- 791

  Fly  1092 PSPSHGHESNSEDSSLS---DGDRTLVETDNMAHRGGGDSQVSSTSHSPQLSSPEDEAASHDAMM 1153
                     .|.|.:|.   |||..:.:.|:                      ||::.:.     
Mouse   792 ---------VSLDKALDELMDGDIIVFQKDD----------------------PENDNSE----- 820

  Fly  1154 RVHAYCNGNGSYAAADVVDPLLLPTSTNHF--FYATKVECVDVVGTGSSSGHQSDEEAQLRKPTR 1216
                                  |||:..:|  .|    ..|||:....:..:...          
Mouse   821 ----------------------LPTAKEYFRDLY----HRVDVIFCDKTIPNDPG---------- 849

  Fly  1217 AYKLLVGTHMRMGAFK--KHIEQ-------LIQVPAAHFKLQRKHDNNLSNNQNNSLVHLIEGET 1272
               .:|....||..|:  |.:.|       |:|    .||.|...|     ...|.|.|..|| |
Mouse   850 ---FVVTLSNRMNYFQVAKTVAQRLNTDPMLLQ----FFKSQGYRD-----GPGNPLRHNYEG-T 901

  Fly  1273 LTVELGKTLEPDEFKAKIHF----LRLADIDNETSKLPCVCEWVYNANTTAEQAKKELVAKLHRI 1333
            |. :|.:..:|.:.| |:::    :::.|.:|..| ..|                          
Mouse   902 LR-DLLQFFKPRQPK-KLYYQQLKMKITDFENRRS-FKC-------------------------- 937

  Fly  1334 DAKYATLSVQNCRIWLKGGRIPIKILSDDETLYCDMRSSIAAEFIVQECEEEVDPQPK-DDSLTL 1397
                         |||..     :...::.|||.|....:  ..:::||::.|:...| ...|.|
Mouse   938 -------------IWLNS-----QFREEEITLYPDKHGCV--RDLLEECKKAVELGDKASGRLRL 982

  Fly  1398 FVRRWCPAKLEFGKFQEITLDQDSEIRLSLS-------QISDIPIDKLSYMKLN 1444
                     ||...::.|.:.|:.|:...||       :|.:||:|::...|.|
Mouse   983 ---------LEIVSYKIIGVHQEDELLECLSPATSRTFRIEEIPLDQVDIDKEN 1027

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp47NP_523937.2 TEBP_beta <119..234 CDD:254188
Rib_recp_KP_reg 122..265 CDD:282899
peptidase_C19C 394..780 CDD:239124 126/386 (33%)
UCH 395..776 CDD:278850 124/381 (33%)
Usp7XP_006522201.1 COG5077 96..1141 CDD:227409 260/1159 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5077
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D387934at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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