DRSC/TRiP Functional Genomics Resources

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Protein Alignment Usp47 and USP24

DIOPT Version :9

Sequence 1:NP_523937.2 Gene:Usp47 / 38644 FlyBaseID:FBgn0016756 Length:1556 Species:Drosophila melanogaster
Sequence 2:XP_016856320.1 Gene:USP24 / 23358 HGNCID:12623 Length:2640 Species:Homo sapiens


Alignment Length:1546 Identity:326/1546 - (21%)
Similarity:529/1546 - (34%) Gaps:529/1546 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 DLVNLNALESQLMYE----VAGFEPQLKNHLIL---LPSGSWDGDVTKRFELPIKRVVVKKVMKS 119
            :::..:::.|::.||    |.....||...|::   :|: ..|.|:||                 
Human  1236 NVMQRDSIPSEVDYETRQGVYSICLQLARFLLVGQTMPT-LLDEDLTK----------------- 1282

  Fly   120 DGEKAKSPATGEKKKRVVGEKTKKKPASGSSSPSKAKTTSEDSLAKTSISSESS-------PEKT 177
            ||.:|.|    .:..|.|..:|       |...|...|..:.|..:.|:|..||       |...
Human  1283 DGIEALS----SRPFRNVSRQT-------SRQMSLCGTPEKSSYRQLSVSDRSSIRVEEIIPAAR 1336

  Fly   178 SKIKT--------------------TAAKISKPGSEKAPRASPEECP-----ELSTEINSKNTSS 217
            ..|:|                    .|.::...||.:..:.|...||     .||:..::.::.|
Human  1337 VAIQTMEVSDFTSTVACFMRLSWAAAAGRLDLVGSSQPIKESNSLCPAGIRNRLSSSGSNCSSGS 1401

  Fly   218 E-SPVA------KKTAKVTSKPTL---ELLSPI------------------------------KP 242
            | .|||      .:...|::|.:|   |.||.:                              .|
Human  1402 EGEPVALHAGICVRQQSVSTKDSLIAGEALSLLVTCLQLRSQQLASFYNLPCVADFIIDILLGSP 1466

  Fly   243 SSPIKELDCEPVDTLSKQQ------------------LSEQLQLYP-----QGRN--LISP---- 278
            |:.|:.:.|:.:.|||:..                  |:.||.|:.     :|.|  |:|.    
Human  1467 SAEIRRVACDQLYTLSQTDTSAHPDVQKPNQFLLGVILTAQLPLWSPTSIMRGVNQRLLSQCMEY 1531

  Fly   279 -------VDDAPS----DLFISDAEQLSD---------------------DDLALG--------- 302
                   :||..:    .|.||.|..|.|                     |::.|.         
Human  1532 FDLRCQLLDDLTTSEMEQLRISPATMLEDEITWLDNFEPNRTAECETSEADNILLAGHLRLIKTL 1596

  Fly   303 ---ASASPTMLGPGY------DY-----------GAPTGDSDVEGVTGVTDPSTIGTDDGTYPAL 347
               ..|...|||...      |:           .:|.|.:.:             :....:|..
Human  1597 LSLCGAEKEMLGSSLIKPLLDDFLFRASRIILNSHSPAGSAAI-------------SQQDFHPKC 1648

  Fly   348 SNFYRRKYGGDELRAWQRVNTTGADFVSS-------------------ATTETE----AEARQAS 389
            |.      ....|.|:: |....||...|                   .|.|.:    .::|.:|
Human  1649 ST------ANSRLAAYE-VLVMLADSSPSNLQIIIKELLSMHHQPDPALTKEFDYLPPVDSRSSS 1706

  Fly   390 LGPRGYVGLVNQAMTCYLNSLLQALFMTPEFRNALYRWEFDNDNEAKNIPYQLQKLFLNLQTSPK 454
                |:|||.|...|||:|::.|.|:|.|....:|...:.|.||...::.||:|.||.:|..|..
Human  1707 ----GFVGLRNGGATCYMNAVFQQLYMQPGLPESLLSVDDDTDNPDDSVFYQVQSLFGHLMESKL 1767

  Fly   455 AAVETTDLTRSFGWDSTEAW--QQHDIQELCRVMFDALEHKFKNTKQANLISNLYEGKMNDYVKC 517
            ......:..:.|...:.|.:  :|.|..|....:.|.::...|...:..:..|.::|..:|...|
Human  1768 QYYVPENFWKIFKMWNKELYVREQQDAYEFFTSLIDQMDEYLKKMGRDQIFKNTFQGIYSDQKIC 1832

  Fly   518 LECNTEKTREDTFLDIPLPVRPFGSSSAYGSIEEALRAFVQPETLDGNNQYLCEKCKKKCDAHKG 582
            .:|.....||:.|:.:.|.|      ::..|:|.:|..||:.|.|:|:|.|.|||||:|....|.
Human  1833 KDCPHRYEREEAFMALNLGV------TSCQSLEISLDQFVRGEVLEGSNAYYCEKCKEKRITVKR 1891

  Fly   583 LHFKSFPYILTLHLKRFDFDYQTMHRIKLNDRVTFPQTLNLNTFINRSGNSGEQNSQLNGTVDDC 647
            ...||.|.:|.:||.||.||:::...||.::::.||..||:..:                ||   
Human  1892 TCIKSLPSVLVIHLMRFGFDWESGRSIKYDEQIRFPWMLNMEPY----------------TV--- 1937

  Fly   648 STADSGSAMEDDNLSSGVVTTASSSQHENDLNDEDEGIDMSSSTSKSAKQGSG---------PYL 703
                ||.|.:|          :||...||               .:|..||.|         ...
Human  1938 ----SGMARQD----------SSSEVGEN---------------GRSVDQGGGGSPRKKVALTEN 1973

  Fly   704 YELFAIMIHSGSASGGHYYAYIKD---FDNNEWFCFNDQNVTSITQEDIQ------RSFGG---P 756
            |||..:::|||.|..||||::|||   ....:|:.|||   |.|.:.|:.      ..|||   |
Human  1974 YELVGVIVHSGQAHAGHYYSFIKDRRGCGKGKWYKFND---TVIEEFDLNDETLEYECFGGEYRP 2035

  Fly   757 NGSYYSSAYTSST----NAYMLMYRQVDAKRNELVAK-----------------VADFPEHIKTL 800
            .....::.||...    |||||.|::|..:.:.::.|                 ....||.....
Human  2036 KVYDQTNPYTDVRRRYWNAYMLFYQRVSDQNSPVLPKKSRVSVVRQEAEDLSLSAPSSPEISPQS 2100

  Fly   801 LPKLHSEEETRVSRLGRHITVTDL--ALPDLYKPRVY--FYNPSLKKMKITRVYVSQSFNINLVL 861
            .|:.|.....|:|.|.:.:...:.  ...:....|:|  ..:.:||.||...||.|..|:..|.|
Human  2101 SPRPHRPNNDRLSILTKLVKKGEKKGLFVEKMPARIYQMVRDENLKFMKNRDVYSSDYFSFVLSL 2165

  Fly   862 MSAYEMLNVEQFA-PLSRCRL-VAYNSSMDTIIQS-------LESCTDPALTELRAAQNYSLD-- 915
            .|    ||..:.. |...|.. |:...::..:.|:       |...|:..:..:.|..:.|.|  
Human  2166 AS----LNATKLKHPYYPCMAKVSLQLAIQFLFQTYLRTKKKLRVDTEEWIATIEALLSKSFDAC 2226

  Fly   916 ------------------FLLEYRAEDQEFEV-----YPPNGITWY---------VFKVDLSTMA 948
                              ||||....:....|     ...:...:|         :.:|.|:.:.
Human  2227 QWLVEYFISSEGRELIKIFLLECNVREVRVAVATILEKTLDSALFYQDKLKSLHQLLEVLLALLD 2291

  Fly   949 MDGP---------FLVYSAARERE---ASDVLRRSIALRLHISEQQFLLATVRATVPKAFVSYDP 1001
            .|.|         |.:::...:::   |.|:|.|..|||..||   |||...|..          
Human  2292 KDVPENCKNCAQYFFLFNTFVQKQGIRAGDLLLRHSALRHMIS---FLLGASRQN---------- 2343

  Fly  1002 HPTPEALQHLQNMANTQFKSITYFYLNVPNTDAATLEMLGVPTVESVECASGGDVVDAAMMNGVA 1066
                   ..::..::.|.:.    :.|:.||.|..:       :.|          |.:....||
Human  2344 -------NQIRRWSSAQARE----FGNLHNTVALLV-------LHS----------DVSSQRNVA 2380

  Fly  1067 PGHMSSSNDYDWRRYKRDLVEPMSQPSPSHGHESNSEDSSLSDGDRTLVETDNMAHRGGGDSQVS 1131
            ||.........        :.|.|...|.  ||.......:|:|...|:|.              
Human  2381 PGIFKQRPPIS--------IAPSSPLLPL--HEEVEALLFMSEGKPYLLEV-------------- 2421

  Fly  1132 STSHSPQLSSPEDEAASHDAMMRVHAY---CNGNGSYAAADVVDPLLLPTSTNHFFYAT------ 1187
                   :.:..:...|..|::.:..|   ||.:.|:.....:.. .|.|:..|....|      
Human  2422 -------MFALRELTGSLLALIEMVVYCCFCNEHFSFTMLHFIKN-QLETAPPHELKNTFQLLHE 2478

  Fly  1188 --------KVECVDVV-----GTGSSSGHQSDEEAQLRKPTRAY---KLLVGTHMRMGAFKKHIE 1236
                    :||.|..|     |..:...|.:..::     :|.|   |.||....:..|.|::.:
Human  2479 ILVIEDPIQVERVKFVFETENGLLALMHHSNHVDS-----SRCYQCVKFLVTLAQKCPAAKEYFK 2538

  Fly  1237 QLIQVPAAHFK-----LQRKHDNNLSNNQNNSLVHLIEGETLTVELGKTLE 1282
            :    .:.|:.     ||:|...:....|:|     :..||.|   |||.:
Human  2539 E----NSHHWSWAVQWLQKKMSEHYWTPQSN-----VSNETST---GKTFQ 2577

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Usp47NP_523937.2 TEBP_beta <119..234 CDD:254188 33/153 (22%)
Rib_recp_KP_reg 122..265 CDD:282899 43/232 (19%)
peptidase_C19C 394..780 CDD:239124 121/412 (29%)
UCH 395..776 CDD:278850 119/407 (29%)
USP24XP_016856320.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5077
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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