Sequence 1: | NP_523937.2 | Gene: | Usp47 / 38644 | FlyBaseID: | FBgn0016756 | Length: | 1556 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002932051.3 | Gene: | usp40 / 100486255 | XenbaseID: | XB-GENE-980927 | Length: | 1226 | Species: | Xenopus tropicalis |
Alignment Length: | 1373 | Identity: | 299/1373 - (21%) |
---|---|---|---|
Similarity: | 454/1373 - (33%) | Gaps: | 482/1373 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 392 PRG---YVGLVNQAMTCYLNSLLQALFMTPEFRNALYRW---------EFDN-DNEAKNIPYQLQ 443
Fly 444 KLFLNLQTSPKAAVETTDLTRSFGWDSTEAWQQHDIQELCRVMFDALEHKFKNTKQANLISNLYE 508
Fly 509 GKMNDYVKCLECNTEKTREDTFLDIPLPVRPFGSSSAYGSIEEAL-RAFVQPETLDGNNQYLCEK 572
Fly 573 CKKKCDAHKGLHFKSFPYILTLHLKRFDFDYQTMHRIKLNDRVTFPQTLNLNTFINRSGNSGEQN 637
Fly 638 SQLNGTVDDCSTADSGSAMEDDNLSSGVVTTASSSQHENDLNDEDEGIDMSSSTSKSAKQGSGPY 702
Fly 703 LYELFAIMIHSGSASGGHYYAYIKDFDN------------------------------------- 730
Fly 731 ----------------------------------------------------------------- 730
Fly 731 ---------------------NEWFCFNDQNVTSITQEDIQRSFGGPNGSYYSSAYTSSTNAYML 774
Fly 775 MYRQVDAKRNELVAKVADF--PEHIKTLLPKLHSEEETRVSRLGRHITVTDLALPDLYKPRVYFY 837
Fly 838 NPSLKKMKITRVYVSQSFNI-NLVLMSAYEMLNVEQFAPLSRCRLVAYNSSMDTIIQSLESCTDP 901
Fly 902 ALTELRAAQNYSLDFLLEYRAEDQEFEVYPPNGITWYVF------KVDLSTMAM-DG-PFLVYSA 958
Fly 959 AREREASDVLRRSIALRLHISEQQFLLATVRATVPKAFVSYDPHPTPEALQHLQNMANTQFKSIT 1023
Fly 1024 YFYLNVPNTDAATLEMLGVPTVESVECASGGDVVDAAMMNGVAPGHMSSSNDYDWRRYKRDLVEP 1088
Fly 1089 MSQPSPSHGHESNS--EDSSLSDGDRTLV-ETDNMAHRGGGDSQVSSTSHSPQLSSPEDEAASHD 1150
Fly 1151 A---MMRVHAYCNGNGSYAAADVVDPLLLPTSTNHFFYATKVECVDVVGTGSSSG------HQSD 1206
Fly 1207 ------------EEAQLR-------------KPTRAYKLLV-GTHMRMGA-----------FKKH 1234
Fly 1235 IEQLIQ---VPAAHFKLQRKHD------NNLSNNQNN-SLVHLIEGETLTVELGKTLEPDEFKAK 1289
Fly 1290 IHFLRLA----------DIDNETSKLPCVCE-WVYNANTTAEQ-------------AKKELVAKL 1330
Fly 1331 HRIDAKYATL-----------SVQNCRIWLKGGRIPIKILSDDETLYCDMRSSIAAEFIVQECEE 1384
Fly 1385 EVDPQPKDDSLTLFVRRWCPAKLEFGKFQEITLD--QDSEIRLSLSQIS---DIPIDKLSYMKLN 1444
Fly 1445 SNFPCTSISALSVNESSSW-YSVPTTLDKYPLNSTQTGNIYLYKDRTVPARELTLEERRLMNARE 1508
Fly 1509 KARLDRVG 1516 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Usp47 | NP_523937.2 | TEBP_beta | <119..234 | CDD:254188 | |
Rib_recp_KP_reg | 122..265 | CDD:282899 | |||
peptidase_C19C | 394..780 | CDD:239124 | 141/522 (27%) | ||
UCH | 395..776 | CDD:278850 | 138/514 (27%) | ||
usp40 | XP_002932051.3 | UBP12 | <5..>69 | CDD:227847 | 22/32 (69%) |
Peptidase_C19 | 41..321 | CDD:351799 | 123/350 (35%) | ||
UBP12 | <439..477 | CDD:227847 | 17/49 (35%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D77113at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24006 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 2.110 |