DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DnaJ-1 and Samd13

DIOPT Version :10

Sequence 1:NP_523936.2 Gene:DnaJ-1 / 38643 FlyBaseID:FBgn0263106 Length:334 Species:Drosophila melanogaster
Sequence 2:NP_064474.1 Gene:Samd13 / 56764 RGDID:708544 Length:223 Species:Rattus norvegicus


Alignment Length:228 Identity:70/228 - (30%)
Similarity:107/228 - (46%) Gaps:39/228 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 DFYKILGLERKASDDEIKKAYRKLALKYHPDKNKSPQ--AEERFKEIAEAYEVLSDKKKRDIFD- 65
            ::||:||:.:.||..:||||:.:|||:.|||||...:  |||:||::||||::|||.|||..:| 
  Rat     3 NYYKVLGVPQDASSSDIKKAFHQLALQVHPDKNPGDREAAEEKFKQVAEAYQILSDAKKRKDYDR 67

  Fly    66 ----NYGEDGLKGGQPGPDGGGQPGAYTYQFHGDPRATFAQFFGSSDPFGAFFTGGDNMFSG--- 123
                ...|:.::|     ||..:...........||.||.......|.|     .||.:|:|   
  Rat    68 SRWSRTKEELIRG-----DGRDETNWEEEICSRRPRRTFQTVIEDEDLF-----SGDYLFTGPMT 122

  Fly   124 -GQGGNTNEIFWNIGG--DDMFAFNAQAPSRKRQQD-----PPIEHD-----LFVSLEEVDKGCI 175
             .:.|::|  |:.:..  |..|:......|:....|     |.|.|.     |..:..::..|  
  Rat   123 HSRRGSSN--FFTVTPIIDTGFSTFVSQESKSSPDDSEAFVPYISHGMGKFRLVTTCSQIMNG-- 183

  Fly   176 KKMKISRMATGSNGPYK--EEKVLRITVKPGWK 206
            |::...|:.....||.|  .|::.|.....|||
  Rat   184 KRVVTKRVVENIQGPKKIENERLFRWNPSRGWK 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DnaJ-1NP_523936.2 DnaJ_bact 4..332 CDD:274090 70/228 (31%)
Samd13NP_064474.1 PRK14300 3..>177 CDD:172788 59/185 (32%)
DnaJ 3..66 CDD:395170 33/62 (53%)

Return to query results.
Submit another query.