DRSC/TRiP Functional Genomics Resources

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Protein Alignment DnaJ-1 and dnajc3

DIOPT Version :9

Sequence 1:NP_523936.2 Gene:DnaJ-1 / 38643 FlyBaseID:FBgn0263106 Length:334 Species:Drosophila melanogaster
Sequence 2:XP_012812335.1 Gene:dnajc3 / 496977 XenbaseID:XB-GENE-997043 Length:504 Species:Xenopus tropicalis


Alignment Length:124 Identity:51/124 - (41%)
Similarity:66/124 - (53%) Gaps:27/124 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KDFYKILGLERKASDDEIKKAYRKLALKYHP----DKNKSPQAEERFKEIAEAYEVLSDKKKRDI 63
            :|:|||||::|.|...||.|||||||.::||    |:.:..:||::|.:||.|.|||:|.:||..
 Frog   393 RDYYKILGVKRNAKKQEIIKAYRKLAQQWHPDNFQDEEEKKKAEKKFIDIASAKEVLTDPEKRSR 457

  Fly    64 FDNYGEDGLKGGQPGPDGGGQPGAYTYQFHG--------DPRATFAQFFGSSDPFGAFF 114
            || .|||.|       |...|.||....||.        :|       |||..||...|
 Frog   458 FD-AGEDPL-------DPESQQGAGGPHFHRGWNQWQGFNP-------FGSGGPFSFKF 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DnaJ-1NP_523936.2 DnaJ 1..333 CDD:223560 51/124 (41%)
DnaJ 4..65 CDD:278647 32/64 (50%)
DnaJ_C 157..320 CDD:199909
dnajc3XP_012812335.1 TPR repeat 37..65 CDD:276809
PEP_TPR_lipo 47..>366 CDD:274350
TPR repeat 70..100 CDD:276809
TPR repeat 105..133 CDD:276809
TPR repeat 154..182 CDD:276809
TPR repeat 187..217 CDD:276809
TPR repeat 222..250 CDD:276809
TPR repeat 256..281 CDD:276809
TPR repeat 300..335 CDD:276809
TPR repeat 340..368 CDD:276809
TPR repeat 374..397 CDD:276809 1/3 (33%)
DnaJ 392..>494 CDD:223560 47/115 (41%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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