DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sse and AT5G28550

DIOPT Version :10

Sequence 1:NP_523935.1 Gene:Sse / 38640 FlyBaseID:FBgn0035627 Length:634 Species:Drosophila melanogaster
Sequence 2:NP_198207.1 Gene:AT5G28550 / 832952 AraportID:AT5G28550 Length:286 Species:Arabidopsis thaliana


Alignment Length:304 Identity:52/304 - (17%)
Similarity:101/304 - (33%) Gaps:92/304 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   133 GLTRISEKCNSLPQEWCVLQLCKSFNPATTYSVFNEIIASD---------GAIYLTLLRHCRSSQ 188
            |.|..|.....:||...:|:|..    |..::...|.:.:|         .|.::..:|..|:..
plant    39 GYTDSSTSWQGIPQADVILRLYS----AGRWTPDKECLGTDFDKTLLNVVMAAFIFSMRTLRNVD 99

  Fly   189 LGPICLKISNENTANLFREYSTLVERFRRVVTVDPLNMKGKEAKQKYWEELNGFDTFQQKLLADF 253
            :..:...::|:     ::..:.|||.......:.|..:|                    .|.|.|
plant   100 VKRLLAIVTNQ-----WKITNRLVEDVIASPWISPPELK--------------------FLFASF 139

  Fly   254 RDIISPYSFLFFGKRYDCTVVQKQIKATYTRVDDFCLLNQWGTHQRVLLSQAASHANRLEIAD-- 316
            .||    |..|:..::    ::|.     :.|...|:...| |..|:|   ...:.|:.::::  
plant   140 HDI----SVAFYNNKH----LEKA-----SMVFKLCIRTVW-TCVRLL---CQIYVNKSDLSEDC 187

  Fly   317 --------------LKLICYELSSNENEIQSAYELLKGLASDWAEVEERQPLASRRFPIILVVDE 367
                          .|...|..:.:::..:...:|...:..:|.|.|:.........||:     
plant   188 LPKEAIIDFVSEACSKSAFYLDNLHQHGARETEKLHVFILENWPEAEDLIKKLPDPTPIV----- 247

  Fly   368 RLDHLHWEQLV------TVQEFSRVKSLHCLWRLFQNHKSNIKH 405
                ..|.:||      ..|..|||..:..      ||..::.|
plant   248 ----KQWVKLVHELFLGCAQRCSRVGMISL------NHVFDVPH 281

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SseNP_523935.1 Peptidase_C50 171..530 CDD:460974 43/266 (16%)
AT5G28550NP_198207.1 None

Return to query results.
Submit another query.