DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sse and sep-1

DIOPT Version :9

Sequence 1:NP_523935.1 Gene:Sse / 38640 FlyBaseID:FBgn0035627 Length:634 Species:Drosophila melanogaster
Sequence 2:NP_491160.1 Gene:sep-1 / 171912 WormBaseID:WBGene00004775 Length:1262 Species:Caenorhabditis elegans


Alignment Length:606 Identity:115/606 - (18%)
Similarity:215/606 - (35%) Gaps:152/606 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 QRPTAEELIKSATKLEKKDYKSKKFLQNIIKYLQQMEQEKQPKKPINEIPEYLDFL--------- 124
            :||..|:|.|:....:|:.::..:....                  ||:..|...|         
 Worm   613 RRPKVEKLEKNLQPFDKERFEKVRLAMR------------------NEMNHYGHILYREWRCRLF 659

  Fly   125 ----DDVQDPTEGL------TRIS---------EKC-----------------NSLPQEWCVLQL 153
                ...:||.|..      |:|.         |||                 .|:|.|..::|:
 Worm   660 AYVGRTSRDPWEAAYAWAESTQIGARNAVQSRLEKCKRGLVTMSGHDRFKTCVQSMPDEMTLVQI 724

  Fly   154 CKSFNPATTYSVFNEIIASDGAIYLTLLRHCRSSQLGPICLKISNENTANLFREYSTLVERFRRV 218
            .               :|.|..|||..|...|.    ||.:.:::      :.:...|:::|..:
 Worm   725 A---------------MADDKTIYLVKLHADRD----PIIMPLAH------YSQAVELMDKFTFL 764

  Fly   219 VTVDPLNMK--GKEAKQKYWEELNGFD----TFQQKLLADFRDIISPYSFLFFGKRYDCTVVQKQ 277
            :..|.:..|  |....:::|:.....|    ||..::...|..:.:  |.|....:......:..
 Worm   765 LDEDEMIAKYPGDITPEEFWKRRKIVDGRMMTFVDEVQKHFLGVAA--SLLMPSGQLGPKAAELA 827

  Fly   278 IKATYTRVDDFCLLNQWGTHQRVLLSQAASHANRLEIADLK------LICYELSSNENEIQSAYE 336
            ||        ...|::.|    :||.:|.....:.::.|.|      |...|:.:.:.:.:|...
 Worm   828 IK--------IHKLSKGG----LLLGEAKEMVYQSKLMDAKSWEALILRFCEMRTTDEKFKSFLP 880

  Fly   337 LLKGLASDWAEV-EERQPLASRRFPIILVVDERLDHLHWEQLVTVQEF---SRVKSLHCLWRLFQ 397
            |:.   .:..|| .:...:.:.:....||:...|....||:|....|:   .|..|:|..:...:
 Worm   881 LMH---RNSVEVMNQDDSIVTEKKYTYLVICPHLSQFCWERLPIFDEYPYVGRQVSIHSTFSQLE 942

  Fly   398 NHKSNIKHGYYTTNIKRGMCVINPDADLVNSGRRLRSFFEYWLSQWQHLFETVPNEEVMVKQALQ 462
            ..||..|......:::....:::||.:|..:.:|:..:...:  .|:....:.|....:.....|
 Worm   943 AMKSQEKQIPLQIDVQNAYYILDPDNNLGETQKRMVEYINKF--NWEGTVGSAPKSNEISAALSQ 1005

  Fly   463 ADCFVYAGHGSGLQYVNGRIICRARVRSVVFLFGCDSTRMLGTGL-YSALYGAHDYYHGALCPSI 526
            .|.|.:.|||||...:...::.::...::..|.||.|.|.:...| :.......||.. |.||.|
 Worm  1006 RDAFFFIGHGSGSSVMPRSVLKQSTCNAISLLMGCGSVRTIPQALGFDGKTAILDYAM-AKCPLI 1069

  Fly   527 VGTLMPALDGNMDTVSVTILSRWLAPGDNKVIPWTHIDRVPWLKNGIIKGKD------------- 578
            ||.|....||.:|...:.::.....  |:|.:  |.||::..|...:.:.:.             
 Worm  1070 VGCLWTVTDGEIDRFLIRMIDDCFE--DSKSL--TGIDKLRQLSEAMHEARSKARLKYLTGAAVV 1130

  Fly   579 ---------ETTPTM-NDQPN 589
                     :|||.: .||.|
 Worm  1131 MYGLPVVAKQTTPFVEKDQRN 1151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SseNP_523935.1 Peptidase_C50 171..538 CDD:281555 80/383 (21%)
sep-1NP_491160.1 Peptidase_C50 729..1081 CDD:308914 79/381 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160167650
Domainoid 1 1.000 61 1.000 Domainoid score I6929
eggNOG 1 0.900 - - E1_COG5155
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S7216
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003217
OrthoInspector 1 1.000 - - otm14566
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R264
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.810

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