Protein Alignment lin-28 and AT1G75560

DIOPT Version :9

• Sequence 1: NP_647983.1
• Gene: lin-28 / 38639
• FlyBaseID: FBgn0035626
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: NP_001077828.1
• Gene: AT1G75560 / 843892
• AraportID: AT1G75560
• Length: 257
• Species: Arabidopsis thaliana
• Alignment Length: 138
• Identity: 34/138 - (24%)
• Similarity: 48/138 - (34%)
• Gaps: 54/138 - (39%)

  Fly    76 FRSLGEQEEVEFECQRTSRGLEATRVSSRHGGSCQGSTYRPRINRRTRRMR--------CYNC-- 130
            |||...::          |.:.:.|||           |....:||.|..|        |.||
plant    19 FRSRSPRD----------RRMRSERVS-----------YHDAPSRREREPRRAFSQGNLCNNCKR 62

  Fly   131 -GEFA---------------NHIASECALGPQPKRCHRCRGEDHLHADCPHKNVTQSHSNS---- 175
             |.||               .|||:||.   ...||..||...|:.::|.::.:..|...|
plant    63 PGHFARDCSNVSVCNNCGLPGHIAAECT---AESRCWNCREPGHVASNCSNEGICHSCGKSGHRA 124

  Fly   176 KSISNNSS 183
            :..||:.|
plant   125 RDCSNSDS 132

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lin-28	NP_647983.1	CSP_CDS	41..101	CDD:239905	4/24 (17%)
AT1G75560	NP_001077828.1	PTZ00368	55..172	CDD:173561	22/81 (27%)
		PTZ00368	114..247	CDD:173561	5/19 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910