Sequence 1: | NP_647983.1 | Gene: | lin-28 / 38639 | FlyBaseID: | FBgn0035626 | Length: | 195 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_665832.1 | Gene: | Lin28a / 83557 | MGIID: | 1890546 | Length: | 209 | Species: | Mus musculus |
Alignment Length: | 205 | Identity: | 76/205 - (37%) |
---|---|---|---|
Similarity: | 108/205 - (52%) | Gaps: | 23/205 - (11%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MENVQLENGLERRTTSQSSTSSANPANLASPTEECGCVR-LGKCKWFNVAKGWGFLTPN------ 58
Fly 59 -DGGQEVFVHQSVIQMSGFRSLGEQEEVEFECQRTSRGLEATRVSSRHGGSCQGSTYRPR----I 118
Fly 119 NRRTRRMRCYNCGEFANHIASECALGPQPKRCHRCRGEDHLHADCPHKNVTQSHSNSKSISNNSS 183
Fly 184 SSAAQEKSEE 193 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
lin-28 | NP_647983.1 | CSP_CDS | 41..101 | CDD:239905 | 32/66 (48%) |
Lin28a | NP_665832.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..31 | 6/29 (21%) | |
CSP_CDS | 42..111 | CDD:239905 | 34/68 (50%) | ||
Flexible linker | 113..136 | 8/22 (36%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 177..209 | 5/28 (18%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167841970 | |
Domainoid | 1 | 1.000 | 66 | 1.000 | Domainoid score | I9890 |
eggNOG | 1 | 0.900 | - | - | E1_COG1278 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 129 | 1.000 | Inparanoid score | I4631 |
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S4997 |
OMA | 1 | 1.010 | - | - | QHG45847 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000228 | |
OrthoInspector | 1 | 1.000 | - | - | otm43801 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_105612 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR46109 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4631 |
SonicParanoid | 1 | 1.000 | - | - | X1972 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
15 | 14.740 |