Protein Alignment lin-28 and AT5G52380

DIOPT Version :9

• Sequence 1: NP_647983.1
• Gene: lin-28 / 38639
• FlyBaseID: FBgn0035626
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: NP_200051.1
• Gene: AT5G52380 / 835314
• AraportID: AT5G52380
• Length: 268
• Species: Arabidopsis thaliana
• Alignment Length: 115
• Identity: 26/115 - (22%)
• Similarity: 47/115 - (40%)
• Gaps: 30/115 - (26%)

  Fly    61 GQEVFVHQS---VIQMSGFRSLGEQEEVEFECQRTSRGLEATRVSSRHGGSCQGSTYRPRINRRT 122
            |:..|:..|   :.::...:|..|:.::..:|:|....|:          :|.     .:.|..:
plant    73 GEGCFICHSKTHIAKLCPEKSEWERNKICLQCRRRGHSLK----------NCP-----EKNNESS 122

  Fly   123 RRMRCYNCGEFANHIASECALGPQPKR--------CHRCRGEDHLHADCP 164
            .:..|||||: ..|..|.|   |.|..        |..|:|:.|:..:||
plant   123 EKKLCYNCGD-TGHSLSHC---PYPMEDGGTKFASCFICKGQGHISKNCP 168

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lin-28	NP_647983.1	CSP_CDS	41..101	CDD:239905	8/42 (19%)
AT5G52380	NP_200051.1	PTZ00368	66..197	CDD:173561	26/115 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910