Protein Alignment lin-28 and PHIP1

DIOPT Version :9

• Sequence 1: NP_647983.1
• Gene: lin-28 / 38639
• FlyBaseID: FBgn0035626
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: NP_191094.1
• Gene: PHIP1 / 824700
• AraportID: AT3G55340
• Length: 597
• Species: Arabidopsis thaliana
• Alignment Length: 140
• Identity: 28/140 - (20%)
• Similarity: 37/140 - (26%)
• Gaps: 79/140 - (56%)

  Fly    98 ATRVSSRHGGSCQGSTYRPRINRRTRRMRCYNCGEFANHIASECALGPQ---------------- 146
            ||.|||            .::.||.    ||.||| ..|:::.|.:..|
plant   384 ATTVSS------------SKVKRRV----CYECGE-KGHLSTACPIKLQKADDQANSKLGQETVD 431

  Fly   147 ----------PK------------------------------------RCHRCRGEDHLHADCPH 165
                      ||                                    .|:.|..:.||...||.
plant   432 GRPAMQSYGLPKNSGDSYYMNETYASTNETYNGGYSASAVGTGKVKRRNCYECGEKGHLSTACPI 496

  Fly   166 KNVTQSHSNS 175
            |....||:||
plant   497 KLQNTSHTNS 506

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lin-28	NP_647983.1	CSP_CDS	41..101	CDD:239905	2/2 (100%)
PHIP1	NP_191094.1	RRM	<129..327	CDD:223796
		RRM1_PHIP1	163..234	CDD:240717
		RRM2_PHIP1	263..334	CDD:240718
		PTZ00368	393..592	CDD:173561	23/119 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910