Protein Alignment lin-28 and lin28aa

DIOPT Version :9

• Sequence 1: NP_647983.1
• Gene: lin-28 / 38639
• FlyBaseID: FBgn0035626
• Length: 195
• Species: Drosophila melanogaster
• Sequence 2: XP_017206944.1
• Gene: lin28aa / 799825
• ZFINID: ZDB-GENE-110914-157
• Length: 193
• Species: Danio rerio
• Alignment Length: 190
• Identity: 78/190 - (41%)
• Similarity: 101/190 - (53%)
• Gaps: 38/190 - (20%)

  Fly    34 ECGCVR------------------LGKCKWFNVAKGWGFLTPN--DG-----GQEVFVHQSVIQM 73
            |.||.:                  :|.||||||..|:|||:.|  ||     ..:||||||.:.|
Zfish     3 EGGCAKTEEEEGQAAEEDPRPYHGVGVCKWFNVRMGFGFLSMNTRDGVPLETPVDVFVHQSKLHM 67

  Fly    74 SGFRSLGEQEEVEFECQRTSRGLEATRVSSRHGGSCQGSTYRPR----INRRTRRMRCYNCGEFA 134
            .|||||.|.|.|||..:::|:|||:.||:...|..|.||..||:    ..||.:..||||||...
Zfish    68 EGFRSLKEGESVEFTFKKSSKGLESVRVTGPGGAHCVGSDRRPKGKSVQKRRAKGDRCYNCGGLD 132

  Fly   135 NHIASECALGPQPKRCHRCRGEDHLHADCPHKNVTQSHSNSKSISNNSSSSAAQEKSEEA 194
            :| |.||.|.|||||||.|:...|:.|:||.|        ::..:..|...:|.:|.|||
Zfish   133 HH-AKECKLPPQPKRCHFCQSVAHMVANCPVK--------AQQSTQGSQGKSAGQKQEEA 183

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lin-28	NP_647983.1	CSP_CDS	41..101	CDD:239905	35/66 (53%)
lin28aa	XP_017206944.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C170586407
Domainoid	1	1.000	70	1.000	Domainoid score	I9487
eggNOG	1	0.900	-	-		E1_COG1278
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H47607
Inparanoid	1	1.050	140	1.000	Inparanoid score	I4481
OMA	1	1.010	-	-		QHG45847
OrthoDB	1	1.010	-	-		D1604809at2759
OrthoFinder	1	1.000	-	-		FOG0000228
OrthoInspector	1	1.000	-	-		otm25032
orthoMCL	1	0.900	-	-		OOG6_105612
Panther	1	1.100	-	-	O	PTHR46109
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X1972
SwiftOrtho	1	1.000	-	-
TreeFam	1	0.960	-	-
ZFIN	0	0.000	Not matched by this tool.
	16	15.770